Gene Plim_3897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3897 
Symbol 
ID9140615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5009022 
End bp5010455 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content57% 
IMG OID 
ProductSerine/threonine protein kinase-related protein 
Protein accessionYP_003631907 
Protein GI296124129 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATTC TTCCACAATC CACCGAGCGA CCCACAGACG AAGCGCGGTC GTCGGATGAT 
GAACCCTACG GAAGGGTTGT CTTTATTGAC CACCAGGGGA CGAAACTCCA ACGCGATCTC
TTACGAGGTT CTCTGCTGGT TGGTTCCGCC CATGGCTGCA ATCTGCGATT GAGGTCGAAT
GATGTTGCCC CACAACATTG CCTGATTTTC CGCGATCCGC ACGGACTCAT GGTTCGCGAC
CTCGGAAGCT CAACGGGGAC TCTGCTCAAT GGTCAGCCCA TTCGCGAGAT GTGGCTGCGC
GGCGGAGACC ATCTGCAAGT CGGCGGATTC GAACTGATTG TCGAATCCAA CCTTGCCGAT
CCTGCCCCGC CCGGCTGGAA GCTCGAAGAT TATCTCCTCG TCGAACTTCT GGGTTCAGGC
GGTATGAGCT GGTTGTTTGG CTCCCGGCAT GCCACCTCAG GTTACAAACG GGCCATCAAA
CTCCTGCCCA GCAGGTATTC GCAGCGGATG TTCGATCATT TCCAGCGTGA GGCCAAAGTG
GGGGTCGGTC TCGTTCATCC GCAGATCATT CGTACGGAAC GGATCGTCTC GTGGCAGAAC
CACTGGTTTA TTGTGCTCGA ACTTTTTGAA GGGGCGAGCC TGTCAGAACT TGTAGAACTT
CACGGCCCGC TCCCCTGGCA ACTGGCGTGT CATTTGATTC GACAAGCCGC TCTGGGTGCC
CATTACCTGC ATGGAGCCGG TATTGTTCAT CGCGATCTGA AGCCGGGCAA TCTGCTTGTC
GCGTACGATG GCAATTTGAA AATCATCGAC TTCGGACTCG CCCTCTTACA AGGCGAAGAT
CTTTCGCATG AGCGAGTCGA TGGCAAGAGT CAAATCCTGG GGACTGCCGA CTACATCTCG
CCCGAACAGA CACGCGACAG CAGTCAAATC GATGGCCGGG CCGATGTCTA CAGCCTGGGT
TGTGTGCTCT ACTTCCTGCT GACTGGCCAG CCTCTTTTCA GTCGAAAAAC GGTTTCCGAG
AAAGTCCGCG CTCATCGTCA GGAGGCGCCT CCTCCGCTTC GCGAACTCCT TCCCGAACTA
CCCGCTTCTG TGCAGGAAAC ACTGGTCGCC ATGCTGGCAA AAAATGTGGA TGATCGACCA
GCCACCGCCG AGGAAGTGGC CAACCGACTG GCTCCGTGGT CGGTTCGGCA ACCTGTGGAA
TTCGACTTCC CCAAGCTCCT CCGCAGCCGC TGGGTACAAG CGCATCGTCG GCTCAAGGAA
TGGGTCGGCC GCCAGCAAAA CGCCCTTCTG GACGATTCGT CCGATGATCT GACGAATAAC
GATTCCGAGT CCAACGGCCA AAAACGTTCG TCTTCGAACC GACCCGTTGA ACTGGCGATC
TTCGACGCGA TCCTGCATTC ACAATCGCCA GGCGTCCCAC GGCTCAAGAA ATAG
 
Protein sequence
MTILPQSTER PTDEARSSDD EPYGRVVFID HQGTKLQRDL LRGSLLVGSA HGCNLRLRSN 
DVAPQHCLIF RDPHGLMVRD LGSSTGTLLN GQPIREMWLR GGDHLQVGGF ELIVESNLAD
PAPPGWKLED YLLVELLGSG GMSWLFGSRH ATSGYKRAIK LLPSRYSQRM FDHFQREAKV
GVGLVHPQII RTERIVSWQN HWFIVLELFE GASLSELVEL HGPLPWQLAC HLIRQAALGA
HYLHGAGIVH RDLKPGNLLV AYDGNLKIID FGLALLQGED LSHERVDGKS QILGTADYIS
PEQTRDSSQI DGRADVYSLG CVLYFLLTGQ PLFSRKTVSE KVRAHRQEAP PPLRELLPEL
PASVQETLVA MLAKNVDDRP ATAEEVANRL APWSVRQPVE FDFPKLLRSR WVQAHRRLKE
WVGRQQNALL DDSSDDLTNN DSESNGQKRS SSNRPVELAI FDAILHSQSP GVPRLKK