Gene Plim_3883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3883 
Symbol 
ID9140601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4994879 
End bp4996066 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content57% 
IMG OID 
Productglycosyl transferase group 1 
Protein accessionYP_003631894 
Protein GI296124116 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCATCAC TGGCTGGCCA TGCTCCTCAC ACTTCCACTG TCAGCCACAA CCCATCCATC 
GTCAGTCATA CAGACAATCC GCACATCGAG GAAACTCCCT CCAGGCCACT CAAGGTCTGT
CATGTCAGTC TGACACTGAA GACGGGCGGC CTGGAACGAC TCCTCGTCGA TTTTGCCCGC
AGACATGATC ACGACCGGGC CGAGCTCACC TTCCTCGCCA TGCGCGAAAT CGGCCCCTTT
GCCGAATACA TCCGCGAAAC AGGCTGTGAA GTCCATCAAT TGAAAACTCG CAGCAGGCTT
GCCCAGTTTC AAGAAATGTC AGCCTTCTTT AAAGCTCATC AGTTCGATGT GATTCACACC
CACAATACCT ATCCCCATTT GTATGCGACT CTCGCGGCCC GCTGGAGTGG TGTGCCTGTC
ATCGTCAACA CCCGCCACGG ACAACGCCTC GGCCATAACT GGCGTGCCAA TCTCCAGTAT
CGCATCACCA CCCGGCTCGT CGATCGCATT GTCGCTGTCT CCGATGATGC CGCCCGCCTT
TGTCTGAATG AAGATCGACT CCCCGCCAGT GTCGTCGCAC GCATCTGGAA CGGCATCGAT
CCCGCCCAGT TTGCCTGGCG AGGTTCGTCC CAGGAACTCT CCGCCATCAC GGTCTGTCGC
CTCTCTGCAG AAAAAGATAT CGGCACGCTT CTTAAAGCGG TCGATCGTGT TCGGCGGGTG
CATCCCACCT TTAAACTGAT CATTGTGGGC GATGGTGCCG AACGTCCCCA TCTCGAACAA
CTCGCTGCGC AACTCGATCT CGCCAATCAC GTCAGCTTTC TTGGCGAGCG GCACGATATC
CCGGAACTGC TGGCTCAGGC CGGTTTCTTC GTCAGCTCCT CATTAAGCGA AGGGATCTCG
CTCACTCTGC TGGAAGCGAT GGCTGTCGGC TTACCTGTCG TCGCCACAGC CGTCGGTGGC
AATCCCGAGA TCATTCTGCC AGGTGTCACC GGACAACTGG CACCGGCTGC AGATCCCGAA
CAACTTGCCA GCGCCATGCT CGAAATCTGC CAGCATCGAA ACGACTGGCT GGCCATGGGG
GCTGCAGGAC GCGAACGGGT TCAGGAGTTC TTCCATATCG ACCGCATGAT CGATGACTAC
ACACGCCTGT ATGAAACCTT ATTGGCCGAA AAATCCAAGC GTCGCTGA
 
Protein sequence
MASLAGHAPH TSTVSHNPSI VSHTDNPHIE ETPSRPLKVC HVSLTLKTGG LERLLVDFAR 
RHDHDRAELT FLAMREIGPF AEYIRETGCE VHQLKTRSRL AQFQEMSAFF KAHQFDVIHT
HNTYPHLYAT LAARWSGVPV IVNTRHGQRL GHNWRANLQY RITTRLVDRI VAVSDDAARL
CLNEDRLPAS VVARIWNGID PAQFAWRGSS QELSAITVCR LSAEKDIGTL LKAVDRVRRV
HPTFKLIIVG DGAERPHLEQ LAAQLDLANH VSFLGERHDI PELLAQAGFF VSSSLSEGIS
LTLLEAMAVG LPVVATAVGG NPEIILPGVT GQLAPAADPE QLASAMLEIC QHRNDWLAMG
AAGRERVQEF FHIDRMIDDY TRLYETLLAE KSKRR