Gene Plim_3880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3880 
Symbol 
ID9140598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4990538 
End bp4991905 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content57% 
IMG OID 
Productglycosyl transferase group 1 
Protein accessionYP_003631891 
Protein GI296124113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGTTT TGTTTTTCTC ACATAACTTT CCCAATCCGT GGAATCCCGG ATTAGGCACC 
TTCAACCGCA CCATGCTCGC CGGTCTGGCA GCTTCGTCGC GTTTGACGGA TACCCATGCC
ACGTCGGATG ATAGTGCCGC ACAACCTTCG CACAAAGTCC GCATCGTTTC CCCGATCCCC
TGGAATCAGT GGTATTCGAG TCTCATTCCC GGCTGCAAAC CCAAGGCCAG CTTCGACACC
TTCGAAGCCA TACCGGGAGT GCCAGCCACT TACTTCCCGT TCTACTATCC ACCCAAAATT
CTCCGCTCTC AATATCACCG CTGCCTCGCC TGGTCGAGCC AGTCCATTCT TCCGCAGATC
CTGCGAGAAG AGCAGCCCGA TGTCGTCCTC TCCTACTGGT CGCATCCCGA TGGTGCCGTC
GCCACGAAAA TGGCTCATGC CGCTGGTATT CCCTCCGTCG TCATGACCGG TGGCAGCGAT
GTCCTTTTGC TGGCACGCTC CGGGAGCCGC CGCCGGGCAA TTCTCGAAGC GCTCCATGCC
GCCGATCTCG TCATCACCGT GAGTGAAAAT CTTTCCCGCG TACTCATTGA AGATGGCCTG
CCACCCGAAA AACTCGCCGT TGTCCGCCGG GGGGTCGATA CCACCATCTT TCAGCCAGGT
TCAAAACGAG CTGCCCGAGA AAAACTCAAA CAGCCCCAAG ATGTCGCCTT GCTGGTCGCA
CCCGGTCGTC TCGCACCTGT CAAAGGTTGG GAGTACCTCT TGCGGGCCTG CCGTTCGCTG
GCAGATCGCG GCCTGAGATT CCGCTGTGTC TTTGTGGGCC ACGGCTCTTT GCAACAGCGT
CTGCAAGCCC AGGCCGACGA ACTACAGATT ACGAACATGA TTCATTTTGC TGGTTCCTGC
CCTCAGCCAG AGCTGGTCGA CTGGTATCGC GCAGCCAGTG TCATTGTGTT ACCCAGCATC
TCCGAAGGCG TGCCCAACGT CCTCATGGAA GCCATGGCCA GTGGTGCAAA TTTCGTAGCC
AGTGAAGTGG GGGGCATTCC AGAAATTGCC GATCCTTATT TTGATCGGCT CGTTCCCCCT
GCACAGCCTC TCTCTCTGGC CAATGCCATT GAGGACTTGC TGAATTATTC GCCAGACAAC
GATACCGAAT CAGGCATGGT GCGTCGCTGG CGCCCCAGCT CACTGGAAGA ATCGACCAAT
CATCTCATCC AGGCACTGAC CACCTGTGTT CACCGTTTTC ACGATCAGGG GGGTTACATC
CGTGGTCTGG GAGATCGCGA GTATCGTCAG CTCATTGAAA CCAACGAATC GTCCATGGCA
GACGAATACG CTTATCTCTC TTCGAGCCTT GTGGGAGGAA CTCCATGA
 
Protein sequence
MRVLFFSHNF PNPWNPGLGT FNRTMLAGLA ASSRLTDTHA TSDDSAAQPS HKVRIVSPIP 
WNQWYSSLIP GCKPKASFDT FEAIPGVPAT YFPFYYPPKI LRSQYHRCLA WSSQSILPQI
LREEQPDVVL SYWSHPDGAV ATKMAHAAGI PSVVMTGGSD VLLLARSGSR RRAILEALHA
ADLVITVSEN LSRVLIEDGL PPEKLAVVRR GVDTTIFQPG SKRAAREKLK QPQDVALLVA
PGRLAPVKGW EYLLRACRSL ADRGLRFRCV FVGHGSLQQR LQAQADELQI TNMIHFAGSC
PQPELVDWYR AASVIVLPSI SEGVPNVLME AMASGANFVA SEVGGIPEIA DPYFDRLVPP
AQPLSLANAI EDLLNYSPDN DTESGMVRRW RPSSLEESTN HLIQALTTCV HRFHDQGGYI
RGLGDREYRQ LIETNESSMA DEYAYLSSSL VGGTP