Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3880 |
Symbol | |
ID | 9140598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 4990538 |
End bp | 4991905 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | glycosyl transferase group 1 |
Protein accession | YP_003631891 |
Protein GI | 296124113 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAGTTT TGTTTTTCTC ACATAACTTT CCCAATCCGT GGAATCCCGG ATTAGGCACC TTCAACCGCA CCATGCTCGC CGGTCTGGCA GCTTCGTCGC GTTTGACGGA TACCCATGCC ACGTCGGATG ATAGTGCCGC ACAACCTTCG CACAAAGTCC GCATCGTTTC CCCGATCCCC TGGAATCAGT GGTATTCGAG TCTCATTCCC GGCTGCAAAC CCAAGGCCAG CTTCGACACC TTCGAAGCCA TACCGGGAGT GCCAGCCACT TACTTCCCGT TCTACTATCC ACCCAAAATT CTCCGCTCTC AATATCACCG CTGCCTCGCC TGGTCGAGCC AGTCCATTCT TCCGCAGATC CTGCGAGAAG AGCAGCCCGA TGTCGTCCTC TCCTACTGGT CGCATCCCGA TGGTGCCGTC GCCACGAAAA TGGCTCATGC CGCTGGTATT CCCTCCGTCG TCATGACCGG TGGCAGCGAT GTCCTTTTGC TGGCACGCTC CGGGAGCCGC CGCCGGGCAA TTCTCGAAGC GCTCCATGCC GCCGATCTCG TCATCACCGT GAGTGAAAAT CTTTCCCGCG TACTCATTGA AGATGGCCTG CCACCCGAAA AACTCGCCGT TGTCCGCCGG GGGGTCGATA CCACCATCTT TCAGCCAGGT TCAAAACGAG CTGCCCGAGA AAAACTCAAA CAGCCCCAAG ATGTCGCCTT GCTGGTCGCA CCCGGTCGTC TCGCACCTGT CAAAGGTTGG GAGTACCTCT TGCGGGCCTG CCGTTCGCTG GCAGATCGCG GCCTGAGATT CCGCTGTGTC TTTGTGGGCC ACGGCTCTTT GCAACAGCGT CTGCAAGCCC AGGCCGACGA ACTACAGATT ACGAACATGA TTCATTTTGC TGGTTCCTGC CCTCAGCCAG AGCTGGTCGA CTGGTATCGC GCAGCCAGTG TCATTGTGTT ACCCAGCATC TCCGAAGGCG TGCCCAACGT CCTCATGGAA GCCATGGCCA GTGGTGCAAA TTTCGTAGCC AGTGAAGTGG GGGGCATTCC AGAAATTGCC GATCCTTATT TTGATCGGCT CGTTCCCCCT GCACAGCCTC TCTCTCTGGC CAATGCCATT GAGGACTTGC TGAATTATTC GCCAGACAAC GATACCGAAT CAGGCATGGT GCGTCGCTGG CGCCCCAGCT CACTGGAAGA ATCGACCAAT CATCTCATCC AGGCACTGAC CACCTGTGTT CACCGTTTTC ACGATCAGGG GGGTTACATC CGTGGTCTGG GAGATCGCGA GTATCGTCAG CTCATTGAAA CCAACGAATC GTCCATGGCA GACGAATACG CTTATCTCTC TTCGAGCCTT GTGGGAGGAA CTCCATGA
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Protein sequence | MRVLFFSHNF PNPWNPGLGT FNRTMLAGLA ASSRLTDTHA TSDDSAAQPS HKVRIVSPIP WNQWYSSLIP GCKPKASFDT FEAIPGVPAT YFPFYYPPKI LRSQYHRCLA WSSQSILPQI LREEQPDVVL SYWSHPDGAV ATKMAHAAGI PSVVMTGGSD VLLLARSGSR RRAILEALHA ADLVITVSEN LSRVLIEDGL PPEKLAVVRR GVDTTIFQPG SKRAAREKLK QPQDVALLVA PGRLAPVKGW EYLLRACRSL ADRGLRFRCV FVGHGSLQQR LQAQADELQI TNMIHFAGSC PQPELVDWYR AASVIVLPSI SEGVPNVLME AMASGANFVA SEVGGIPEIA DPYFDRLVPP AQPLSLANAI EDLLNYSPDN DTESGMVRRW RPSSLEESTN HLIQALTTCV HRFHDQGGYI RGLGDREYRQ LIETNESSMA DEYAYLSSSL VGGTP
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