Gene Plim_3875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3875 
Symbol 
ID9140593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4983758 
End bp4984921 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content58% 
IMG OID 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_003631886 
Protein GI296124108 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.295355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCATGAAT CTGCTGCACG CACGGGTCGC CCGACATCTC CAGGCGCCCT GGGCGGTCGT 
GTCTCTCGAC AAAGCCACCG AGCTTCGCCC ACCTGGGGCA CACGGATTGT GGCCCTGCTG
GCGATGGCCA ATCTGGCCAT GGTCATGTTC ACCAGCTGGC TCGTCTGGAG TGTCTCCGAA
CGCTGGTGGT TAGGTTCTGT CGCCACCTAC GCGCCGCGAG AATTGCTGCT CGTTTCCACA
GGGTTGCTGG CACTGGTCAG CCTGCTCTGG CATCGTCCCT CACTCTTGTT TCATCTGTTT
GCGGGGCTGT GGGTCATTCT GGGAGTAGTC GACTGGTCAC TCGCTCCTCT AATGGAACCA
GAACATGCCA GTCGTTTCAT CGAAGAAACG TTCGACGATG ATAACGATCC TGCACCCGAG
CCGATGACGG GCCGACTCCG TATCGCTTCC TGCAACGTTC AGGATTATCA ACCCGCCTTC
GGAGATGTCC TGCGAGACCT CGAAGAATTA CCACCCGATG TCGTCGCATT CCAGGAATCT
CGCTCCATCA ATCCCTTATG CGAAGACTAC TTTGCCGACT GGCACAAGGT GCAGGTCGAG
TACTTCTTCG TCGCTTCCAA ATGGCCTCTC GAAGTCCTTG GCCATTGCGA CGATTCGCCA
TTCGAACGCT CTTCGGGGCT CGTCGTCAAA GTCGCTCATC CTGAGCATCC CTTTGCACTG
GCCAACATTC ACCTGATGAC CGCCAGACCC GGCCTTCGTG AACTCACCCC CGGCTCAATT
CTTCGCGGCG ATGGCCCTGC CGAACTGGCA GCGCTGACAC TCATGCGCTC CGAAGAAATG
CAGCAACTCC GCCACTTCAT CGAAAATGCT CGCAATGGAC TCCCTCTCAT CGTCGTGGGT
GATTTCAACA CTCCCGCAAG CAGCCACGTC TTTCAGGAAG CCTGGGGAGA TCTCACCGGT
GGTTTCGAAA CTGCTGCGAT CGGGCCTTCC CATACCGCCC CCTGCCGACC CATCAGCTTC
TGGCCGGGAA CCTGGCCCTG GTCGCGAATT GACCACATCC GCGTCACCCC CGAATGGAAA
TTCCATCAAT TCGTGACGGG CGATCGCAAT GGTTCCGATC ATCGTCTCGT GGCCTGTGAA
CTCGAACTTC TACCCTTCGA TTGA
 
Protein sequence
MHESAARTGR PTSPGALGGR VSRQSHRASP TWGTRIVALL AMANLAMVMF TSWLVWSVSE 
RWWLGSVATY APRELLLVST GLLALVSLLW HRPSLLFHLF AGLWVILGVV DWSLAPLMEP
EHASRFIEET FDDDNDPAPE PMTGRLRIAS CNVQDYQPAF GDVLRDLEEL PPDVVAFQES
RSINPLCEDY FADWHKVQVE YFFVASKWPL EVLGHCDDSP FERSSGLVVK VAHPEHPFAL
ANIHLMTARP GLRELTPGSI LRGDGPAELA ALTLMRSEEM QQLRHFIENA RNGLPLIVVG
DFNTPASSHV FQEAWGDLTG GFETAAIGPS HTAPCRPISF WPGTWPWSRI DHIRVTPEWK
FHQFVTGDRN GSDHRLVACE LELLPFD