Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3875 |
Symbol | |
ID | 9140593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 4983758 |
End bp | 4984921 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | Endonuclease/exonuclease/phosphatase |
Protein accession | YP_003631886 |
Protein GI | 296124108 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.295355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCATGAAT CTGCTGCACG CACGGGTCGC CCGACATCTC CAGGCGCCCT GGGCGGTCGT GTCTCTCGAC AAAGCCACCG AGCTTCGCCC ACCTGGGGCA CACGGATTGT GGCCCTGCTG GCGATGGCCA ATCTGGCCAT GGTCATGTTC ACCAGCTGGC TCGTCTGGAG TGTCTCCGAA CGCTGGTGGT TAGGTTCTGT CGCCACCTAC GCGCCGCGAG AATTGCTGCT CGTTTCCACA GGGTTGCTGG CACTGGTCAG CCTGCTCTGG CATCGTCCCT CACTCTTGTT TCATCTGTTT GCGGGGCTGT GGGTCATTCT GGGAGTAGTC GACTGGTCAC TCGCTCCTCT AATGGAACCA GAACATGCCA GTCGTTTCAT CGAAGAAACG TTCGACGATG ATAACGATCC TGCACCCGAG CCGATGACGG GCCGACTCCG TATCGCTTCC TGCAACGTTC AGGATTATCA ACCCGCCTTC GGAGATGTCC TGCGAGACCT CGAAGAATTA CCACCCGATG TCGTCGCATT CCAGGAATCT CGCTCCATCA ATCCCTTATG CGAAGACTAC TTTGCCGACT GGCACAAGGT GCAGGTCGAG TACTTCTTCG TCGCTTCCAA ATGGCCTCTC GAAGTCCTTG GCCATTGCGA CGATTCGCCA TTCGAACGCT CTTCGGGGCT CGTCGTCAAA GTCGCTCATC CTGAGCATCC CTTTGCACTG GCCAACATTC ACCTGATGAC CGCCAGACCC GGCCTTCGTG AACTCACCCC CGGCTCAATT CTTCGCGGCG ATGGCCCTGC CGAACTGGCA GCGCTGACAC TCATGCGCTC CGAAGAAATG CAGCAACTCC GCCACTTCAT CGAAAATGCT CGCAATGGAC TCCCTCTCAT CGTCGTGGGT GATTTCAACA CTCCCGCAAG CAGCCACGTC TTTCAGGAAG CCTGGGGAGA TCTCACCGGT GGTTTCGAAA CTGCTGCGAT CGGGCCTTCC CATACCGCCC CCTGCCGACC CATCAGCTTC TGGCCGGGAA CCTGGCCCTG GTCGCGAATT GACCACATCC GCGTCACCCC CGAATGGAAA TTCCATCAAT TCGTGACGGG CGATCGCAAT GGTTCCGATC ATCGTCTCGT GGCCTGTGAA CTCGAACTTC TACCCTTCGA TTGA
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Protein sequence | MHESAARTGR PTSPGALGGR VSRQSHRASP TWGTRIVALL AMANLAMVMF TSWLVWSVSE RWWLGSVATY APRELLLVST GLLALVSLLW HRPSLLFHLF AGLWVILGVV DWSLAPLMEP EHASRFIEET FDDDNDPAPE PMTGRLRIAS CNVQDYQPAF GDVLRDLEEL PPDVVAFQES RSINPLCEDY FADWHKVQVE YFFVASKWPL EVLGHCDDSP FERSSGLVVK VAHPEHPFAL ANIHLMTARP GLRELTPGSI LRGDGPAELA ALTLMRSEEM QQLRHFIENA RNGLPLIVVG DFNTPASSHV FQEAWGDLTG GFETAAIGPS HTAPCRPISF WPGTWPWSRI DHIRVTPEWK FHQFVTGDRN GSDHRLVACE LELLPFD
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