Gene Plim_3868 details

Gene Information

• Locus tag: Plim_3868
• ID: 9140586
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 4972925
• End bp: 4975015
• Gene Length: 2091 bp
• Protein Length: 696 aa
• Translation table: 11
• GC content: 56%
• Product: proton-translocating NADH-quinone oxidoreductase, chain L
• Protein accession: YP_003631879
• Protein GI: 296124101

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCAAACT GGTCTGACAT CGCCCTGGCG ACGATTCCCG CTGCACCTCT GGCTGCCGCC 
ATCTGGTGCG GCACAGTCGC TCAGGTTGTC CGGCGCACAA CAGCCCACCG GCCCGTTGTG 
CTCGCCCTGG CACTTTCATT GGTAGCGGCT GCCTATGTCC TCTTCGTCGT CGTTCCCGGT 
TCAGTCGTCG ATTCACCCGC CGCTCACAGC CAGATAACTC CCATCGAGAG CTCTGGCGAA 
AGCCTGGTGA AGCCTGTCTC GTTGATAGCT TCCGCAACCC CTGCTTCAGC AACCGGCGAA 
CATCATGGGC CAGCCCATAA GGCTTACATT TTTGAAGTCT ATCGCTGGAT GTCTGTGGGC 
GGGTTGACTG TCGATATCGT GCTCCGAGCC GACGCGATGA CAGCCCTCAT GCTCGTGATG 
GTCAACTTTG TCAGTCTGCT GGTGGCGATT TTTGCATCGA GCTACATGCA TGGCGACAAA 
GGCTATCCCC GCTTCTTTGG AGCGATGGCT CTGTTCGTCT TCTCCATGAA CATGCTTGTA 
CTGGCGGGGA ACTTCATTGA AGTCTTTATC TTCTGGGAAG CTGTCGGGCT GTGCTCTTAT 
CTGCTCATTG GCCACTGGTA TCATAAACCT TCCGCCGCCG CCGCCGCCCG CAAGGCCTTT 
GTGGTGAATC GAATTGGCGA CTTTGGTCTG ATGACTGCCA TTTTCCTGAT TTACCGCACC 
TTTGGCTCAG TAGATTTTGA AACCGTTCTC GATCCTGCCA GGCTGGCCGA ACTCGCTGCT 
GCTCAGCCCG GCTTAGTCAC CACGATTGCC TTGCTGCTCC TCCTGGGGGC GATTGGTAAG 
TCGGCACAGT TCCCTTTGCA TGTCTGGCTT CCCGATGCGA TGGAAGGCCC CACTCCCGTC 
AGTGCGCTGA TCCATGCCGC CACGATGGTG ACTGCCGGTG TTTATCTCAT TGCCCGCACC 
ACGCCGATTT TTGTCCATTC GCCAACCGCA CAGCTCGTCG TGGCCGGTGT GGGGGCAATC 
ACTGCTCTGG TGGCGGCGAT CACAGCACTT TGCCAGTACG ACCTTAAACG CGTGCTGGCT 
TACTCCACAG TCAGTCAGCT CGGTTACATG TTCATGGCTT TAGGAGCCGC AGCAGCGAGT 
CCTGCCCTGG CGGCTCATGC AGAAACATTT GCGATGTTTC ACCTGCTGAC TCATGCGTTT 
TTCAAAGCTG TCCTCTTCCT GGCAGCAGGG AGCGTGATGC ATGCCATGGG GGATGTCATC 
GACATGCGAC GCTTCAGTGG ATTAAGGAAA GCACTCCCCA TCACACATAT CACCTTCCTC 
TGCGGGGCAT TGGCACTGGC GGGCTTCCCG CTCCTCTCGG GCTTCTGGAG CAAAGACGAG 
ATTCTCGCAG TTGTCTGGGA AGCGACTCAA ACCGGCGATT ACAAAACGTA CTTCTACCTG 
ATCCTGGGTG TCGGTCTGCT GACAAGTCTT CTCACCGCGT TCTATACATT CCGAGCTTAC 
TATCTCACTT TCCATGGCCC GGAACGATTT CCAGAAGAAG CGGGTCATCA TCCTCACGAT 
GCCTCACCGG CCATGGCCAT TCCGCTCTAC ATCCTGGCGG CACTGGCTGT CGTTGCTGGT 
CTGATTCTTG GCCCGACACA CATCTATGCT CACTACATTG AAATGACCCC CAATTTCCCG 
ACGGCTGCAC CCGCTGGCAT GAATGTGGGC ATGATGGTTT TGAGCACAGT CCTGGCGCTG 
GGTGGCATCG GATTGGCATA TACCATCTAT GGCAAAGCCA CTCGTCCCGA ATACTCAGAT 
GCTCGACCAC TCAGCCTTTG GGAAAATGTT TCCCTCAACG GGCTGTACCT GGATCAGCTC 
TATGGAGCCT TGATCGTCCG GCCTATGGCG ACTTTGTCGG CTGTGTGTGA GTTTGTTGAT 
CGCATGATCC TCGACAAGAT TGTGGATGCC GTCGGGCTCA TCCCGATCAT TGCGGGGGGG 
ATGATTCGGC CATTACAAAA TGGACTCGTC AGTTCGTATG CAGCCGTCAT GCTGCTGGGT 
GTGATTGTGG CATTGGCCAG TGTTTTAAGA GCCATCGCCA GTGTGACCTG A 

 

Protein sequence

MANWSDIALA TIPAAPLAAA IWCGTVAQVV RRTTAHRPVV LALALSLVAA AYVLFVVVPG 
SVVDSPAAHS QITPIESSGE SLVKPVSLIA SATPASATGE HHGPAHKAYI FEVYRWMSVG 
GLTVDIVLRA DAMTALMLVM VNFVSLLVAI FASSYMHGDK GYPRFFGAMA LFVFSMNMLV 
LAGNFIEVFI FWEAVGLCSY LLIGHWYHKP SAAAAARKAF VVNRIGDFGL MTAIFLIYRT 
FGSVDFETVL DPARLAELAA AQPGLVTTIA LLLLLGAIGK SAQFPLHVWL PDAMEGPTPV 
SALIHAATMV TAGVYLIART TPIFVHSPTA QLVVAGVGAI TALVAAITAL CQYDLKRVLA 
YSTVSQLGYM FMALGAAAAS PALAAHAETF AMFHLLTHAF FKAVLFLAAG SVMHAMGDVI 
DMRRFSGLRK ALPITHITFL CGALALAGFP LLSGFWSKDE ILAVVWEATQ TGDYKTYFYL 
ILGVGLLTSL LTAFYTFRAY YLTFHGPERF PEEAGHHPHD ASPAMAIPLY ILAALAVVAG 
LILGPTHIYA HYIEMTPNFP TAAPAGMNVG MMVLSTVLAL GGIGLAYTIY GKATRPEYSD 
ARPLSLWENV SLNGLYLDQL YGALIVRPMA TLSAVCEFVD RMILDKIVDA VGLIPIIAGG 
MIRPLQNGLV SSYAAVMLLG VIVALASVLR AIASVT