Gene Plim_3866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3866 
Symbol 
ID9140584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp4971503 
End bp4972222 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content56% 
IMG OID 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 6 
Protein accessionYP_003631877 
Protein GI296124099 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTGGG TTTCTGAGAA CATCGCATTA ATCGGAACGC TCGTCCTGCT GGGGGCGAAC 
ATTCTCCTGT TGTTTCCATC GACTGGCCGC AAGTCAGGGA TTCCGGGCTT TCTCCTGCTG 
CCAGTCACAT TGGCTGGTCT AGGCTGGGTG TTTTTGCAGC CGACAGGTGA TCTTGTTCGT 
GATCTCCTGT TTTACATGGC TGCCGGGACG GCTGTCCTGG GTGGCCTGCT GATGACGACA 
CAGCGGAATC CGGTCTATGC CGCCCTGTGG TTTGCCGTGG CCACACTGGG AGTCTGTGGT 
CTGTTTGTTA TCAACTCAGC CCCATTCCTG GCGGCTGTCA CGATCATCGT CTATGCCGGT 
GCCATCGTCG TCACGTTCGT CTTCGTGATC ATGCTGGCTC AGCAGGAGCA GGGATCAGGC 
TACGATCGCA TTCCGCAACA ACCTTTCCTC GCCACTGTGC TTGGCTGCCT GCTTGTGGGG 
ACGATGCTCC TGGGGATCGA AAAAACTTTC GGGCCAGAGT CTTCCCGGCT TTCAGTCGAT 
CGAACGGCAC TTCACGTTTC TTCACTGCCC GTTGAAAATG ATCTCGGTTC GCCAGGTGGC 
GTGGGCCGGT CGCTCTTCAC CGATTACTTG TTTGCAGTCG AACTCGCTGG AACAGTTCTA 
CTCGTGGCTA CCATTGGTGC CATTGCGATT GCACCTCGCC GTCCACAGGG GAGTTTATGA
 
Protein sequence
MNWVSENIAL IGTLVLLGAN ILLLFPSTGR KSGIPGFLLL PVTLAGLGWV FLQPTGDLVR 
DLLFYMAAGT AVLGGLLMTT QRNPVYAALW FAVATLGVCG LFVINSAPFL AAVTIIVYAG 
AIVVTFVFVI MLAQQEQGSG YDRIPQQPFL ATVLGCLLVG TMLLGIEKTF GPESSRLSVD 
RTALHVSSLP VENDLGSPGG VGRSLFTDYL FAVELAGTVL LVATIGAIAI APRRPQGSL