Gene Plim_3864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3864 
Symbol 
ID9140582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4969360 
End bp4970532 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content54% 
IMG OID 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_003631875 
Protein GI296124097 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTTGGG AATTCTTCCT CGTCACGTTG ATAACGATTG GTGTGGCCTT CGGGGGATTG 
ATGGGCACAA TTGCCTATCT GATCCTGGTC GAGCGACGTC TGGCCGCCTT TATTCAGGAC
CGCTATGGCC CGAACCGTGT CGGCTGGGCC GGTCTGCTGC AGCCCATTGC TGATGGTGCC
AAATTCCTGC TCAAGGAAGA CGTGATCCCC GGTTACGTTA ACAAAACGCT CTACATCCTG
GGCCCCAGCA TCGCCGTATT TACTGCCATG GCCGGCTTTG CCATCGTCCC CTTCGGACCT
GTCGATCAGG CTCCTTCGTG GATGCGGTTT GTCATCGCTC CCGATGTCAA CATCGGGATG
ATCTACATTT TTTGTGTGGG CAGCCTGGGT GTTTATGGAG TGATTCTCGG CGGCTGGGCA
TCGAACAACA AGTACAGTTC GTTAGGCTCC ATGCGGGCCA GTGCTCAGGT CGTAAGTTAT
GAAATTCCCC TGGGGATGTC GATCATTGGT GTCGTGCTGA TGACCAGCTC TTTGAGTCTC
AACGATATTC TCATGCATCA GGCGAATCAG GGCGTACTGG GCTGGAATGT CTGGACACAG
CCACTCGCGC TGCTGATCTT CTTCGTCTCC GCTCTGGCCG AAACCAATCG CCTCCCCTTC
GACCTTTCTG AATGTGAGCA GGAACTTGTC GGCGGTTTTC ATACCGAATA CAGCTCGATG
AAATTCGCCC TCTACTTCCT GGGGGAATAC GCACACATCA TTACTGTCTG CTTCCTGACT
GCCATTCTCT TCTTCGGTGG TTGGCAGTTC CCTTTGATCG CGGAAGCCGA CAGTGCGTAT
CTGGGAGCAA CTCTGGTCAA AGTGGTCGTG CTGCTGACCA AGGTTCTGAT GATCATTCTG
CTGATCATGT TTATCCGCTG GACAATTCCC CGCTTCCGCT TCGATCAACT GATGAATCTG
GCGTGGCTGG GCCTGATTCC GATGGCTGCT ATGAACATTC TGGTGGTCAT GACTGCCAAA
CAGTTCGACT GGCCCATCTG GACACTGCCG TTAGGTTCGC TGGCGATCTT CGTGGCCGCA
GGTCTGATTG GCACCAGTGG AAAATTCGTT GTCAGCGATC AGACGGTCGA TTTCAGTGAA
TCACCCGAAG GGTATGTCCA CGTTCACTCC TGA
 
Protein sequence
MSWEFFLVTL ITIGVAFGGL MGTIAYLILV ERRLAAFIQD RYGPNRVGWA GLLQPIADGA 
KFLLKEDVIP GYVNKTLYIL GPSIAVFTAM AGFAIVPFGP VDQAPSWMRF VIAPDVNIGM
IYIFCVGSLG VYGVILGGWA SNNKYSSLGS MRASAQVVSY EIPLGMSIIG VVLMTSSLSL
NDILMHQANQ GVLGWNVWTQ PLALLIFFVS ALAETNRLPF DLSECEQELV GGFHTEYSSM
KFALYFLGEY AHIITVCFLT AILFFGGWQF PLIAEADSAY LGATLVKVVV LLTKVLMIIL
LIMFIRWTIP RFRFDQLMNL AWLGLIPMAA MNILVVMTAK QFDWPIWTLP LGSLAIFVAA
GLIGTSGKFV VSDQTVDFSE SPEGYVHVHS