Gene Plim_3860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3860 
Symbol 
ID9140578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4965260 
End bp4965739 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content53% 
IMG OID 
ProductNADH dehydrogenase (ubiquinone) 24 kDa subunit 
Protein accessionYP_003631871 
Protein GI296124093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTAC TTTCGGATGA TTTACGGGCA CGCATTGTTG CGGAGTTTCC GAAATACCCG 
AACAAGCGGG CGGTCACTCT CCCAGCGCTG CATTTAGTGC ATGATGAACT CCGCCATGTT
TCGACGGGTG CGATCGAAGA AATTGCAGAA CTTCTCGAAC TGCACCCCTC CGAAGTTCAT
GACACGATGA CGTTCTACCA ATTCTTCCGT ACGGAAGAAA ATCCATTGGG CAAGCATCGC
GTGTGGGTTT GTCGGAGTAT CAGTTGTGGT CTGCGCGGCG GCGAAGAACT TCTCGCTCAC
ATGTGCGAGA AACTCCACGT CACGCCAGGC GGCACTACAG AGGATGGCAA GATCACACTC
GAGTTCGCGG AATGCCTCGG CGTCTGCGAT GGGGCTCCCT GTGTTCTGGT CGATGAAGAC
TGTGTCCACA ACGTCACTCA TGAAATGGCA GATAAACTGA TTAGTGAATT GAAGGCATAG
 
Protein sequence
MTVLSDDLRA RIVAEFPKYP NKRAVTLPAL HLVHDELRHV STGAIEEIAE LLELHPSEVH 
DTMTFYQFFR TEENPLGKHR VWVCRSISCG LRGGEELLAH MCEKLHVTPG GTTEDGKITL
EFAECLGVCD GAPCVLVDED CVHNVTHEMA DKLISELKA