Gene Plim_3858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3858 
Symbol 
ID9140576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4963409 
End bp4963897 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content53% 
IMG OID 
ProductNADH dehydrogenase (ubiquinone) 30 kDa subunit 
Protein accessionYP_003631869 
Protein GI296124091 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACTTCG CAGCACTCAA TGAGCATTTG GGCGGTGTCC TGAAATCGGA ATCTTTCCGA 
GACAACACAC GCCTGATCGT CCCGGCAGCT CAACTCGATG ATCTCATGTC TCACCTCAAA
CATCACCTGG GGTTCGACAT GCTCAGTGAT GTCACCTGCT GTGATTACCT GGAGTACCCC
GGTGCCACAG ATCGCTATGG CGTCATCTAT GTCGTGGTGA ACACCAAGAC TCGAGAGCGG
CTTGTCGTCA AAACTTTCGT GAATGATCCA TCGCCCACTT TGCCCTCCAT GTACCGCCAC
TGGAAAACTG CAGACTGGAC GGAACGCGAA GTTTATGACC TGTTTGGCAT TCACTTCGCC
GGCCACCCGA ATCTGCAGCG AATCCTTTGC CCCCCTGAGT TTGAAAGCCA CGCACTCCGC
AAAGATTACC CGCTTAAAGG GCGTGGAGAA CGACATAACT TCCCGGTGAT CACCAGAGCC
GAAAGTTAA
 
Protein sequence
MDFAALNEHL GGVLKSESFR DNTRLIVPAA QLDDLMSHLK HHLGFDMLSD VTCCDYLEYP 
GATDRYGVIY VVVNTKTRER LVVKTFVNDP SPTLPSMYRH WKTADWTERE VYDLFGIHFA
GHPNLQRILC PPEFESHALR KDYPLKGRGE RHNFPVITRA ES