Gene Plim_3856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3856 
Symbol 
ID9140574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4962211 
End bp4962588 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content52% 
IMG OID 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 3 
Protein accessionYP_003631867 
Protein GI296124089 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGGCT TATTCGCAGT TCTGATCTAT ACCGGAGTGC TGGTCGGGTT CGTGATCACG 
AATCTGATTC TGACTCATAT AATCGGGCCG TCCAAAAAGA CGGCCGTTAA GCAGATGCCT
TACGAATCGG GCATGGATCC TGTGGGCGAT GCCCGCCAGC CCTTCGATGT GAAGTTTTAT
CTGGTCGCGA TTCTGTTTCT GATCTTCGAT GTTGAGCTTT TGTTCATGTA CCCCTGGGCG
GTGGCTGCTT ACAAGGGTGA TGGCGGAGTT CCTGCGGAAC TTTCCTCGAC AGTTTACGGC
GTCATGCTCG TCTTCTTTGG TACTCTGGCA ATTGCCTACA TCTACGCCTG GCGAAAGGGT
GTGTTCAAAT GGCGATAG
 
Protein sequence
MDGLFAVLIY TGVLVGFVIT NLILTHIIGP SKKTAVKQMP YESGMDPVGD ARQPFDVKFY 
LVAILFLIFD VELLFMYPWA VAAYKGDGGV PAELSSTVYG VMLVFFGTLA IAYIYAWRKG
VFKWR