| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3847 |
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| Symbol | |
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| ID | 9140565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 4947182 |
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| End bp | 4948654 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | glycoside hydrolase family 10 |
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| Protein accession | YP_003631858 |
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| Protein GI | 296124080 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCTCC TGAGGTTTGT GGTTGATTCC GAAGAGATCC TCAAAGACTG GCCAGAAGTC
TACCACGGTT ATCTGGCTGG CCCGGATGGT CGCATTTTCC CTTCCCGCAT GGAAGTGGAA
GGAAATGTGC TTGGGTGCCG CAGGAATACT TCTGAAAGCG GTAAGTTTCA TATTGCCTGG
CCTGTGCCGG GGCACGGTCG TCTGCTGCTT TGTACAGGAT CGTTACCGGA ACGGCAGGAA
CCTTATGTTC TGGCCTTGGA ACTGGCTCGC GGCAAGATCG TACTGTTGCG CGATCAGGCA
TCTCAGTGGG AGTTATCCGG GCTGCGAATT CCTGTCAATT ATTATGATCT GCTGAAGCAG
GCTCAGGCTC ATTTTCGGCA AGCAGTGTTA GAAGACGACC TGGGCCGCAT GTGTGAGCTG
GCTTCTCAAG CAATTGTGAA CGCCTGTGAT GCTGCGAAGG AGTTGGGCCA GGCATATTCA
CGACAGGCAC TGGCCAGTCG CCAGCAGCGG TACCCTCACT TGCCGGCGAT TCTTGGAATC
GAGCTCGAGC ATGCGGCTCC CCATGAGAAC TGGTCGTTGA TTACGAGTCC TTTCAATTCC
GCCTGTCTGC GGCTGAACTG GAAAGAAGTC GAACCCCAGG AAGGTGATTA TTCGTGGGAG
TTGACCGATC AGCAGTTGGA GTGGTGTGAA TCGCGCAAGA TGGTGGTTCG TGCCGGGCCG
CTGCTCGATT TTGGCCCGGG GGGATTACCC GGCTGGCTGG CTCCATGGGA ACATGATCCG
TTCAATCTGC AGAGCTTTAT CTGCGATTTT ATCGAAACCG CGATGCTTCG ATACCAGGGC
CGGGTCAGAC TGTGGGAAAT CGCGACTCGA TTTAATACGG GTGGAGCATT GAAGTTGCCC
GAAGATCAGC GACTGGCACT TCTTGCCAGA GTGCTGGATA TTGCCCGGCA GGTTGATGAA
GAATCCCAAC TGATTCTGCG AGTCGATCAG CCATGGGGAG ATTATATGGC CAAGGGTCAG
CATCGACTCT CACCCATCCA GACCGTGGAT GCCCTCGTTC GATCGGGAGT GGGTCTGAGT
GGTGCCAACC TGGAGATCGC GGTCGGATAT CAGCCGGCTG CCACCCAGCA TCGAGATCTG
CTCGATTTTT CCAGGCTGAT CGATCTGTGG GGTGGGTTAG GGATCCCTTT GCACGTGACA
CTTTCATGCC CATCGGCAGG AATTGCAGAT CTCGAAACCA CCACCGAGAC CGGAGTTGAT
CCACGATTGT GGAAGAACGG CCCGAGCGAG AGTGAGCAAG CCGAGTGGGC GACTCAGATC
ATGCAGTTAT TGATTGCGAA GCCTGCCGTC GTGGGTGTGA CGTGGAAGCA CCTGAACGAT
GCGACCCCGC ACTCGTTGCC ACATGGTGGC TTGTGGGATG CCAAGTCTCA GCCCAAAGAG
ATTTTTCAGC GGCTGAAGAG TTTGAATTCG TAG
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| Protein sequence | MGLLRFVVDS EEILKDWPEV YHGYLAGPDG RIFPSRMEVE GNVLGCRRNT SESGKFHIAW
PVPGHGRLLL CTGSLPERQE PYVLALELAR GKIVLLRDQA SQWELSGLRI PVNYYDLLKQ
AQAHFRQAVL EDDLGRMCEL ASQAIVNACD AAKELGQAYS RQALASRQQR YPHLPAILGI
ELEHAAPHEN WSLITSPFNS ACLRLNWKEV EPQEGDYSWE LTDQQLEWCE SRKMVVRAGP
LLDFGPGGLP GWLAPWEHDP FNLQSFICDF IETAMLRYQG RVRLWEIATR FNTGGALKLP
EDQRLALLAR VLDIARQVDE ESQLILRVDQ PWGDYMAKGQ HRLSPIQTVD ALVRSGVGLS
GANLEIAVGY QPAATQHRDL LDFSRLIDLW GGLGIPLHVT LSCPSAGIAD LETTTETGVD
PRLWKNGPSE SEQAEWATQI MQLLIAKPAV VGVTWKHLND ATPHSLPHGG LWDAKSQPKE
IFQRLKSLNS
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