Gene Plim_3832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3832 
Symbol 
ID9140550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4927143 
End bp4928183 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content55% 
IMG OID 
ProductTransaldolase 
Protein accessionYP_003631843 
Protein GI296124065 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.310987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACAC CTCTTGAAAC CCTCGTTGCC TGCGGCACCA AAGTCTGGCT CGACAGTATC 
GATCCCGCAC TGGTCGTAGA AAACCGCAAA TTTGGAGCCA CGGGTGCCAC ATCGAATCCA
ATTATCATTG CTGACCTGCT GAAGACGGGT CGCTTTGATG ATCAGATTCG CGCGTTGGTG
GCCGAAGGGC ATTCCGATGA AGCGATTGCC TGGGCGATGA CCGATCGTCT TGTCCGCCAG
GCACAGGAAG TTTTTGCCAG CGTTTACACA GAATCTGCGG GCAATAACGG CTACGTGAGC
TTTGAACTCG ATCCTCTCCT GGAAGATACC GCGAACACGT TGAGTGTGGC TGAAAAGGCC
AAGAAGTATG TCGAGCTGGG TCAGCATTGG GCGGCAGGGC ATTCCAACCG CATGATCAAG
GTCCCCGCGA CACCGGGTGG ATTAGCTGCT CTCGAAGAGC TGGCCGCTTC CGGGATTACG
CTGAATGTGA CGCTGATCTT CTCGGAACGG CAGTATGAAG CGGCTCGGGA AGCGGTTTGG
AAGGGTGCCC AGCGGCACGG CAAGCTTGAA CGCTTCAAAT CGGTTTACAG CATCTTCGTC
AGTCGGATTG ATGTCTATAC CAAGAAGCAC GTTCCCACAT TGATCCCTGC GGCTCAGGGT
CAGGTCGGCA TTGTGAATGC CCAAAGGCTC TGGGCAGAGA ATCAGAAGTT CTGGGCCGAC
AAGAAGCTCC CACTTCAGCA GGAAATCATC TTCGCCAGCA CAGGCACAAA AGACCCGGCA
GAAGCTCCTG ATCGTTATGT GAGTGCACTG GCTGGTTCCG ATATCCAGAC CAACCCACCT
GCGACGAACG CGGCTGTCCA GAGCCTGACA GGTAAGGTTT ACACCCGCAA AGTCGATCAA
TTGCCACCAG CCGACGTTCT GGCCGATATC GATGCAAAAG TCGATTTCGC CAAGATGGAA
CAAGTGCTGA TGGAAGAAGG TCTGGCCAAG TTCGCCGATC CATTCAAGTC ACTTCTTCAG
GTGATCGCTT CCAAGCGCTA G
 
Protein sequence
MPTPLETLVA CGTKVWLDSI DPALVVENRK FGATGATSNP IIIADLLKTG RFDDQIRALV 
AEGHSDEAIA WAMTDRLVRQ AQEVFASVYT ESAGNNGYVS FELDPLLEDT ANTLSVAEKA
KKYVELGQHW AAGHSNRMIK VPATPGGLAA LEELAASGIT LNVTLIFSER QYEAAREAVW
KGAQRHGKLE RFKSVYSIFV SRIDVYTKKH VPTLIPAAQG QVGIVNAQRL WAENQKFWAD
KKLPLQQEII FASTGTKDPA EAPDRYVSAL AGSDIQTNPP ATNAAVQSLT GKVYTRKVDQ
LPPADVLADI DAKVDFAKME QVLMEEGLAK FADPFKSLLQ VIASKR