Gene Plim_3830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3830 
Symbol 
ID9140548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4924311 
End bp4925417 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631841 
Protein GI296124063 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.337981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATCC TGAAAATTGC TGTTGGGCTC GTTCTCACGG TCGTTGTGCT GACACTCTTA 
AGTGCCGCAG TTCTCAATGG GCGAGAACAG GCCCGGCGAT CAGACTGGAT GTACCGGCTG
AAAGAGATTG GCCTGGCACT CCATAACTAC CATGATGTTT ACAATTGCCT GCCACCTGGT
GGAATCTTTA GTGAAGCAGG GCAAGGTTAT CAGGGATGGC CTAGCCGTCT GGCGCAATTT
CAAACGCAGA CTCCCTTTTC GTCTTGGGTT GATGATCGAA TCCCCTGGGA TGATCCCCGG
CAAATCGAAT GGTTTACAAT GGCCCATTGC CGGGAAGGAC GTTGGTGGCA AGACCCTGGC
CTCACCCTCA CGGAGAAAAA TACGTTTCCG CTCATTCATG TCGCGGCCAA CTCCTGGGTC
ATGCATCGCA ATAGTCATGT GACCTTACAA GATGTGGGAG ACCTCGCCTC GACACTTCTG
GCAGCCGATG CTTCGGAACC ATTTGATATT TATGGTTCCA CAACGGCCTG GAGAGACGCC
AGCATTCCTA TCAACAGTTC TCCATCAGGT TTCAGCTCAC ATGGCCGTCC GATGGCTCAT
TGTCTCATGG CCGATGCGAC CGTCCGGTCT GTCGATGTGA ACGTCGACGC ATCGATCTGG
AAACAGATGC AAGGGCCAGA GTCACTCAGA CCAGTTGATA AACTTATTGA CCGTATCCCA
GGCATCCCCC CAGCTCCAAC TCACTTTGAC CGCCGCATCT GGACTGACAT GTTTCACAAG
GACAGTCAGA AAGCAACACT GACCGCTGAT GGTCAACACT TGATTCTCAA TACTGAGTCC
GTTGATCCGT GCTTACTGAG TGAACGGCGA GAGGAAGTCT TCCAATCCTG GCTGATTGAA
TTGGCCGCAT TATGTGCAAA AGGGGATGTG CAATCGGCAA AGTTGTATCG CTATCCATCA
CCCGAAGAGG TGAAGGTTCT ATTGTCCTGC AAGAACCTGA AGACCGTGGA TATTCGTGCA
ATTCGAAATG CACCCGTGAT TCGTCCACTG CTCGAACAAG AGTCACACCG AATCCAAATT
ATTGAGACGC CCGACTCCTC CGAATGA
 
Protein sequence
MNILKIAVGL VLTVVVLTLL SAAVLNGREQ ARRSDWMYRL KEIGLALHNY HDVYNCLPPG 
GIFSEAGQGY QGWPSRLAQF QTQTPFSSWV DDRIPWDDPR QIEWFTMAHC REGRWWQDPG
LTLTEKNTFP LIHVAANSWV MHRNSHVTLQ DVGDLASTLL AADASEPFDI YGSTTAWRDA
SIPINSSPSG FSSHGRPMAH CLMADATVRS VDVNVDASIW KQMQGPESLR PVDKLIDRIP
GIPPAPTHFD RRIWTDMFHK DSQKATLTAD GQHLILNTES VDPCLLSERR EEVFQSWLIE
LAALCAKGDV QSAKLYRYPS PEEVKVLLSC KNLKTVDIRA IRNAPVIRPL LEQESHRIQI
IETPDSSE