| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3826 |
|---|
| Symbol | |
|---|
| ID | 9140544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 4919066 |
|---|
| End bp | 4920793 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | alkaline phosphatase |
|---|
| Protein accession | YP_003631837 |
|---|
| Protein GI | 296124059 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGAAGT TCTGGGGGAA AGTAAGAGGG CAGTTCCGCC TACTGAACAA TCAGCACGTC
GCTGCCTGGA AGGTGATTGC TGCCGCAATT GTTGTGGCGT CTCTGCTGGT TTGGACAGTG
CAGGTCAACA CTGCGGTCGC CACTGAGCCC GCCGCCGTCG CTTTACCGAA TCAATCTTCG
ACAGCACGAA CTTTGAAGAT TCTCCCTCGT GGCGAGGTTC AACTTCAGTT TCTCGGCCGT
TTTCGGCACA GTGAAAAGTC AGGAACATCG GCCACTGAAA TCACGGCTTT TGATCCAACA
ACCAGGCAAC TTTTCGTCGT CAATGTGGAA GATCAGGTCA TCGATGTCCT TGATCTGTCG
CAACCGGCCC TGCCAGTGCG AGTTGACCAG ATCAGCGTCT CAGCTCTGGG AATACCCACA
TCCGTTTCGG CGAGGGCAGG ACGAGTCGTT GCGTCTGTTG CTACAGAAGA TCGTCGCCAA
CGTGGTCATG TTGTCCTGAT TGACCCAGTC CATCGCAAGA TTGTTCACCA GATCCAGGTG
GGTTATGAGC CGGACTGTGT GGCACTGACG AATGATGGAA AACTTCTTGC CGTTGCCAAC
GAAGGTTCCC CGAATGAGAA CTATGATTTT GATCCTGAAG GAACGATCAG TCTGATTGAA
ATTCCCGATG ATCTGGCACA ACTCGCCAAT GCTGAAATCA CGACGATTGA TTTCCGCAGG
TACAACGACA ATCCGGAGAA AATGGGGCCT GGAGTACGGA TCTTTGGGCC GAAGGCGACG
GTCGCTCAGG ATCTGGAGCC CGAATATATC ACGATCTCTG CCGATGGTCA GCTGGCCTGG
GTCAGCCTGC AGGAAAATAA CGCGATTGCC ACCATTGATC TCGAACAGAA GTCTTTAATT
TCCGTAAGAG GTCTGGGCTA TAAAGATCAT TCCCAACCGG GAAATGGTTT CGATGCCAGT
GACCGAGATC AATCGATCAA TATCCGGCCC TGGCCAGTGA AAGGTCTTTA TCAACCCGAT
GGTCTGGCCA ATTTTGTCTC GCATGGAAAG CGATTTATCG TCACCGCCAA CGATGGAAAA
GATCGAGACT ACGAAGGCTT CAGCGAGAGG GCCATGGTCA GCGATCTTCA GCTCGACCCG
CGCAGGTTTC CTCACGCGAA TGAGCTTCAA AAACCAGAGA ATCTTGGTCG TTTACGAGTT
TCCAAAGCCA CGGGTGATCT GAATGGCAAT GGACTGGTCG ACGAACTGCA TGCCTTTGGA
GGAAGATCTT TTTCCATCTG GGATGAGCAA TTCCACCAGA TATTTGATTC CGGCGATCAG
TTGGAGTCGA TTGTGGCCAG TCAACGACCA CACGACTTTA ACAGTGATCA TGAAAAGCGG
GAATTCGACA GCCGAAGTGC AGCGAAAGGG CCAGAGCCCG AGAGCGTGGT CGTTACAGAG
ATTGGTTCAA AGAAGATTGC CATCATTGGT CTTGAACGTC AATCGGGGCT GATGGTCTAT
GATGTCACAA ACCCTGTAAA ACCCGTCTTT GAACAGTTCC TCAGTACGCG AAGTGAATCG
ACACCGTCGG ATTTAGTATC TCCAACGAGC AATGAGGGAG ATTTAGGCCC GGAAGGGTTG
TTAGTGATCC CTGCTCAAGA CAGTCCGACG AAGACACCTC TACTCGTTGT TGCCAACGAA
ATCAGCAATG CCACCGTAAT CTATGAGATC AGGCTGCGTA CGCCCTGA
|
|---|
| Protein sequence | MRKFWGKVRG QFRLLNNQHV AAWKVIAAAI VVASLLVWTV QVNTAVATEP AAVALPNQSS
TARTLKILPR GEVQLQFLGR FRHSEKSGTS ATEITAFDPT TRQLFVVNVE DQVIDVLDLS
QPALPVRVDQ ISVSALGIPT SVSARAGRVV ASVATEDRRQ RGHVVLIDPV HRKIVHQIQV
GYEPDCVALT NDGKLLAVAN EGSPNENYDF DPEGTISLIE IPDDLAQLAN AEITTIDFRR
YNDNPEKMGP GVRIFGPKAT VAQDLEPEYI TISADGQLAW VSLQENNAIA TIDLEQKSLI
SVRGLGYKDH SQPGNGFDAS DRDQSINIRP WPVKGLYQPD GLANFVSHGK RFIVTANDGK
DRDYEGFSER AMVSDLQLDP RRFPHANELQ KPENLGRLRV SKATGDLNGN GLVDELHAFG
GRSFSIWDEQ FHQIFDSGDQ LESIVASQRP HDFNSDHEKR EFDSRSAAKG PEPESVVVTE
IGSKKIAIIG LERQSGLMVY DVTNPVKPVF EQFLSTRSES TPSDLVSPTS NEGDLGPEGL
LVIPAQDSPT KTPLLVVANE ISNATVIYEI RLRTP
|
|---|
| |