Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3815 |
Symbol | |
ID | 9140533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 4902195 |
End bp | 4903598 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | MATE efflux family protein |
Protein accession | YP_003631826 |
Protein GI | 296124048 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.142559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGCTGG TGAACACCAC TTCCTCGCCA CGAGAAGCTG AGCGGCAAAC TTCGTTGCCC GATCATCTCT CCTCGGCGGG TGCCCATCGC GCCGTCATTT TGCTTGCCTG GCCAGTCCTG TTAGAGCAGG TGCTGCATTT TTCGGTCGGG TTCTTCGATG TCTACCTTTC TGGTCGACTG GGGCAGGAGG AAACCGCCGC CATTGGCATG GCGGCTTATG TCAGTTGGCT GGGTTCGATG ATTTTCGGCC TGGTCGGAGT GGGAGCCACC GCACTCATCG CCAGGTTCTG GGGAGCCCAT CAATTTGATG AAGCCCGCAC GATCATTTCG AGAGCCATGG CACTGGCGAT CTGCCTGGGG ATATCGGTTT CTTGCGTCCT GTTCACAATG GCCCCCGGCA TTGTCTGGCT GTTAGGACTC TCGGGAGAAT CCGTCCAGAT TGGTGTGACT TACCTGAGAA TCGACGCCAT CGGTCAGATC TTTTCCGCCT GGGTGCTGGT GGGAGCAGCG AGTCTGCGAG GCGCCGGCGA TATGCGCACT CCGCTCTATG TGCTCTGTCT CACAAGTGTC GTTAACATCG TCCTTTCCAC AACCTTTGTC TATGGCTTGG GGCCTGTTCC CACGCTGGGA GTCAATGGGA TCGTCTACGG AACCGTCTGT GCCCAATTCA CTGGCGCTCT GCTCATGGCC TGGTTTCTGA CATCTGGCAG AACAGTCCTC CAGATCGTCT ACAAAGAGTT TCTGATCCGG CGGGAAAGCA CCTGGCGACT GATGCGCATC GGCGGGCCTG CTGCTCTTGA TGGCGTCGCC ACCTTCACGG GACACTTTCT GTTTCTCATG ATTATATCCC GACTCACCGA CGGAGAAGCG GCCTTTGCGG CTCATATTAT CGGCGTGCGA GTGGAAGCGT TGTCGTATCT GCCAGCAGTC GCCTTTGGTA TTGCCAGCGG AAGCCTGGCC GGTCGCTACC TTGGTGCACA ACGACCCGAT CTGGCTCGTG CCTGTGGCTT TGCTGCTGTC GGTCAGGCCG TCGCATATGC CGCCCTGATG TCCGTCCTGT TCTTTACTTT CGCACCGCAG ATCTACGCCC AGATGCACAT TGACCCGCTC GTGCAGACAA TTGGCGTCGA TCCCTTCAGA CTGATGGCCT GCTATCAGAT TCCAAACGCG ATTCTGATTG TCCTGGTCAG TACCTTGCGG GGTTCGGGAG ATACAAGGTT TCCCCTATGG TGCGCCTTTC TGGGGACTTT CTTTGTCAGA GTCCCCTTGG CGTGGTATCT GGGAATTGGT CTTAACTACG GCTTGTTTGG TGCCTGGATC GGCATGGGAG CTGATAACAT TCTTCGATGT GGCCTGATCA GTTGGCGCTA CCTGGCCGGG CGATGGATTC ATGTCAAAGT CTAG
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Protein sequence | MQLVNTTSSP REAERQTSLP DHLSSAGAHR AVILLAWPVL LEQVLHFSVG FFDVYLSGRL GQEETAAIGM AAYVSWLGSM IFGLVGVGAT ALIARFWGAH QFDEARTIIS RAMALAICLG ISVSCVLFTM APGIVWLLGL SGESVQIGVT YLRIDAIGQI FSAWVLVGAA SLRGAGDMRT PLYVLCLTSV VNIVLSTTFV YGLGPVPTLG VNGIVYGTVC AQFTGALLMA WFLTSGRTVL QIVYKEFLIR RESTWRLMRI GGPAALDGVA TFTGHFLFLM IISRLTDGEA AFAAHIIGVR VEALSYLPAV AFGIASGSLA GRYLGAQRPD LARACGFAAV GQAVAYAALM SVLFFTFAPQ IYAQMHIDPL VQTIGVDPFR LMACYQIPNA ILIVLVSTLR GSGDTRFPLW CAFLGTFFVR VPLAWYLGIG LNYGLFGAWI GMGADNILRC GLISWRYLAG RWIHVKV
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