Gene Plim_3800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3800 
Symbol 
ID9140518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4882205 
End bp4883473 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content57% 
IMG OID 
Productpeptidase T 
Protein accessionYP_003631811 
Protein GI296124033 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCCCG CTACTTGCCA TTTTCGAGAT GAACTCCTGG AACGATTCTT GCGCTATGTG 
CGCATCGAAA CGACGGCGGA CGAAACCAGC CAGACTGTTC CCAGCACCAT GAGCCAGCTC
GATCTCTCCC GACTGCTGTT CGCGGAATGT GAGGCCATGG GGTTGGCCGA TTGTTCGATG
AGTCCTCACG GGGTCGTCAT GGCCACAGTC CCAGCGACCA TTCCGGACGG AGCCGGGGGG
AAGAAACTTC CCGCGATTGC CTGGATTGCT CATGTCGATA CTTCACCTGA GTACAGTGGG
AAAAACGTTC AGCCCATTGT GCATCGCCAT TACGATGGCC GGGACATTCA TCTGCCAGCC
GACCCTCGGC AGATCCATCG CCCTTCCGAA CAGCCCGAAC TGGCTGCTGC CGTGGGACAC
ACCATCATCA CGACCGATGG CTCGACACTG TTGGGTGGCG ATGATAAAGG GGGCGTGGCT
GTCATCATGC AGGCTGCGCG AGAACTGATG CGCAGTGATC TTCCCCATGG GCCGATCCGG
CTCTGCTTTA CCTGCGATGA AGAAATAGGC CGCGGCACCG ATCATCTCGA TCTGGCGGCT
CTCGACTGCA TTTGCGGCTA CACACTCGAT GGTGGTGGGC AAGGTGTCGT CGATAACGAA
ACATTCTCGG CTGATCAGGC CGTGATCACT GTCAAAGGGG TCAACACCCA CCCTTCTGTC
GGCAAAGGAG TCATGGTCAA TGCCATTCGT ATTCTGAGTG AACTCATCGC GCGCCTGCCT
AAACTCGCGG TTTCACCAGA AACAACCGAC GGCCGCGACG GGTTTATTCA TCCTTACCAT
CTCGAAGGGG GAGTGGCCCA AGCTTCCGCC CGGCTCATTC TGCGAGACTT CGAAACCAGC
GGATTAGCAG CACAGGCCCG GATCCTGCAA TCGATCGCAG AGTCGTTGAA GGTCGAATAT
CCGCGTGCCA CGATCGAAAT CGCGATCCAT CCGCAGTATC GCAACATGCG CGACGGATTG
GCCAAAGAAC CCCGAGCTGT GCCGAAGGCT CTGGCTGCCA TGAAAGCCGC CGGGATCGAA
CCGATATTGA GTATCATTCG TGGCGGAACG GATGGTTCTC TCCTTACGGC TAAAGGTTTG
CCTTGCCCGA ATCTCTCGAC TGGCCAGCAT AACCCGCATT CGCCACTCGA ATGGGCCAGC
CTCGATGAAA TGGAAGTGGC TGTCAAAGTA CTGATTCAGC TCGCTATCGA GTGGGGTAAG
CTCGAATAA
 
Protein sequence
MTPATCHFRD ELLERFLRYV RIETTADETS QTVPSTMSQL DLSRLLFAEC EAMGLADCSM 
SPHGVVMATV PATIPDGAGG KKLPAIAWIA HVDTSPEYSG KNVQPIVHRH YDGRDIHLPA
DPRQIHRPSE QPELAAAVGH TIITTDGSTL LGGDDKGGVA VIMQAARELM RSDLPHGPIR
LCFTCDEEIG RGTDHLDLAA LDCICGYTLD GGGQGVVDNE TFSADQAVIT VKGVNTHPSV
GKGVMVNAIR ILSELIARLP KLAVSPETTD GRDGFIHPYH LEGGVAQASA RLILRDFETS
GLAAQARILQ SIAESLKVEY PRATIEIAIH PQYRNMRDGL AKEPRAVPKA LAAMKAAGIE
PILSIIRGGT DGSLLTAKGL PCPNLSTGQH NPHSPLEWAS LDEMEVAVKV LIQLAIEWGK
LE