Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3789 |
Symbol | |
ID | 9140507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 4869303 |
End bp | 4871213 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | arginine decarboxylase |
Protein accession | YP_003631800 |
Protein GI | 296124022 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATGG ACGAAGAACA ACTGCAGGTT GTGCAGAACG TTTACGGAGT CGAAAACTGG TCAGCGGGAT ACTTCGATAT CAATTCGAAG GGCCATCTGA TTGCGAGGCC CGCCGCCGAT GATCCACGAT CGCTCGATCT GTTCGAGCTG GTCAATTCCC TGCGCGATGA ACGGAAGTTG CACACTCCAC TGCTCCTGCG ATTCCCGCAG ATTCTCACCA ATCAGCTTAA AAAGCTGGCC ACATCTTACA TTCAGGCCAT CGAAGAATAC GGCTACCAGG GCCGACACTT TCCGGTCTTC CCGATGAAGG TGAATCCTCG TCGGGAAGTT GTCGAAGAGT TTCTCAAAGA CTCAGCCCGC TTCAACGTGG GTCTGGAATG TGGTTCCAAG CCCGAACTTT ATGCCGGCCT GGCTCAGGTG CAGCATCCCA ATTCGCTGCT GATCTGTAAT GGCTTTAAGG ATGATTCGTT TATTCGCCTG GCCATGCTGG GGGTCGAAGC GGGCAAGAAC GTCGTCATCG TGATTGAAAA GCTCAGCGAG TTGATCACCA CGCTCAATCT GGCAGATGAA ACCGGCGTCA TGCCCATGAT CGGACTGCGA TCAAAACTGT ATTCCCGCGG CTCTGGCAAA TGGGCCTCTT CGGGTGGTGA TTCCGCCAAG TTTGGTCTGA CGACGTCTGA GCTGCTCGAT TGTGTCCGGC TGCTTAAAGA TCGTGGCCGA CTGAGTTCAC TCAAGCTCCT GCACTCGCAC ATCGGCTCAC AGATCACGGA GATCAAACGC GTCAAAATGG CGATGAAGGA AGCCGCCCGC GTTTACGCCA AACTCCGGCA ACTGGGCACT CCCATCGATA CGATGGATAT CGGTGGCGGC CTGGGTGTGG ATTACGATGG CTCGAAGACC CGCTTTGAAT CCTCGATGAA CTACACGGTT CAGGAGTTCG CGAACGATGT GGTCTATACG ATCAAATCGG TCTGCGATGA AGAGAATGTG CCGCATCCAC ATTTGGTGAC CGAGAGCGGC CGCATGATGA CGGCGTATCA TGCCGTCCTG ATTACCAGCA TTCGCGATGA GATTGAAACT TTTGCCGATG ATAAGCCCGA AGTGACTGTT GATGATGACG ACCCGCAGGT GATTGTCGAA CTGAAAGCGC TTTGCGACGG GATCAATCGC AAGAATTTCA CTGAGTTTTA TCACGACGCA CTCGAGCACA AAGACGAACT GCACACGCAG TTCAATCTCG GGCTGATCAG TCTGGAAGAC AGGGCCAAAG GGGAAGTCCT CTTCTGGGAA ACGTGTGCGC GGGCATTGAA AGAAGCTGAT GGCGTCAAAT CGCCACCTGA AGAATTCGAA GACTTACGGC GTATTCTGGC TGCGAAGTAC CTGTGTAATT TTTCGCTCTT TCGCTCGGTC CCTGATAGCT GGGCCATTGG GCAACTCTTC CCGATTATGC CCATTCATCG GCTCGACGAA CCTTTGACCG ATTTTGCGAC ACTTGTGGAT GTCACCTGCG ATTCGGATGG GCGGATTGAC AAATTTGTCG ATCTGAAAGA TGTGCGGGAA GTTCTTGAGC TTCACAAATG GAAGCCGGAA GAGCCGTATT ATCTGGGGAT TTTTCTAGTG GGTGCCTATC AGGAAGTGAT GGGAAGTTTC CACAATCTGT TCGGGCTTCC CAATGAGGCG CATGTGGTGA TGGATGCCGA AGGAAGGTGG CACATTACCA AGCTGATTCA GGGGAGCAAG CTGGGAGAGA TGGTGGCCTT TGCCCGTTAC GACCGGGCAC AGCTGCTGGC CAATTACAAG CAGCAGCTCG AGATTCGCAG GCAGGCTGGC AACCTTTCCG AAGAACGCCT GGATCAACTG GCTCTGGCTT ATGAGGCCAT GATTTCTGAT ACCACTTATC TTTCACGTTG A
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Protein sequence | MSMDEEQLQV VQNVYGVENW SAGYFDINSK GHLIARPAAD DPRSLDLFEL VNSLRDERKL HTPLLLRFPQ ILTNQLKKLA TSYIQAIEEY GYQGRHFPVF PMKVNPRREV VEEFLKDSAR FNVGLECGSK PELYAGLAQV QHPNSLLICN GFKDDSFIRL AMLGVEAGKN VVIVIEKLSE LITTLNLADE TGVMPMIGLR SKLYSRGSGK WASSGGDSAK FGLTTSELLD CVRLLKDRGR LSSLKLLHSH IGSQITEIKR VKMAMKEAAR VYAKLRQLGT PIDTMDIGGG LGVDYDGSKT RFESSMNYTV QEFANDVVYT IKSVCDEENV PHPHLVTESG RMMTAYHAVL ITSIRDEIET FADDKPEVTV DDDDPQVIVE LKALCDGINR KNFTEFYHDA LEHKDELHTQ FNLGLISLED RAKGEVLFWE TCARALKEAD GVKSPPEEFE DLRRILAAKY LCNFSLFRSV PDSWAIGQLF PIMPIHRLDE PLTDFATLVD VTCDSDGRID KFVDLKDVRE VLELHKWKPE EPYYLGIFLV GAYQEVMGSF HNLFGLPNEA HVVMDAEGRW HITKLIQGSK LGEMVAFARY DRAQLLANYK QQLEIRRQAG NLSEERLDQL ALAYEAMISD TTYLSR
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