Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3780 |
Symbol | |
ID | 9140498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 4859349 |
End bp | 4861820 |
Gene Length | 2472 bp |
Protein Length | 823 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003631791 |
Protein GI | 296124013 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCGGT CGCGCGCTTT ATACATTGTT GTTTCTGAGA ACCTCAAAGA GTTCACCCGC TGTCTGAGTT TGTTATTCCT GGGAGGAGTG TGCTGCTTTC TGGGAGGGCA AGTCACTCTG GGGGCAGAGA CTTTGCCCGG ACGCGAGATT CTGGATCTTT CGCTGGTTCC ACCGGTGATT CAGACCCATC CCGGGCCCGA ATATTCGCCG GAGCAGCTTG ACTACTCCAT GACCATCGGG ATTGAACGAA CGTCCAAAGG ACGTTTGTGG GCCGCCTGGG TGGCGGGTGG AGACAGCGAG AAAGGATTTT TTGTGCTGGG CCTGAGTGAT GACGATGGCC AGACGTGGAA GTCGCCACAA CTGGTCATTG ATCCACCCGA AGCACCCACA GGTTTGAAGC GTCGGATTCT TGTCGGAAAT TTATGGACTG ATCCCACCGG CAGACTCTGG CTCTTTTTCG ATCAATCGAT GGGCTATTTT GATGGTCGTG CCGGGAACTG GGCGATCACG TGCGATGACC CCGATGCTGC ATCTCCTGTC TGGTCGGCTC CACGCCGGAT CTGGGATGGT TGCACGCTCA ATAAACCGAC TGTCCTCAAG TCGGGGGAAT GGATGCTTCC CGTTTCATTA TGGGATCGCG GCAAGATCGG TCCTGCGGAA CTCAAAACCG CTGCTCCAGA ACTCGACCCT TACCGCAAGG CCAATGTCCT GGTTTCCCAA GATCAAGGAA AGACGTGGAA CTATCGTGGC GGCGTCGCCT TTCCTGGCCC GCAGTTTGAC GAACATATGA TTATCGAACG CAAGGATGGC ACACTCTGGA TGCTGGCCCG CACCACAGAA GGGATGTTTG AAAGTCTCTC GCAAGATCAG GGAAAGACCT GGAGTCAGCC TGAAATGGCG ATGCCGCATA TCCCGACGAG ATTTCATATC CGTCGGTTGG CTTCAGGAAG CCTGCTGCTG GTCAGGCATG GCCAGGTGGA TGAACGCACA AAACATCGGA CACGACTGAT GGCGTTCCTC TCACATGATG AGGGCCAAAC CTGGGGCGGC GGACTGATGC TCGATGACCG GGGAGGAGTT TCCTACCCGG ATGGTTTTCA GGCTCCCGAT GGAAGAATCT ACATTTCGTA TGACCGCGAG CGGGCGAAAG AGCGGGAAGT GCAGCTGGCT GTTTTTCGGG AAGAGGATGT GGCAGCTGGA AAAATTGTTT CACACGATGC ACGCCTTCAG GGAGTGATCA CCAAGGCCAT GGGCGGGCTT CTCGAATCAA AATTGCCCGG CGTGAAAAAA GACCCCGTGG CGCAGCCAAT TGACGTGAAA CTTCTCGCCA TGGTCGAAGG TTCGCAGGGT CGATGGAAAG ACAAAGCTCT GCAGAATGCG GAGTTCGACC GTACAACGAT TGCCTATGAT GGTATCACAC CGAACAAATT GGTTTGCGAC ACGACACTGC GTCAGTTGCC GGATAAATCG TGGGCGCTCT ACCTGCTGGC GGGTGACGAC ATCGAACCAT CGCCAGGGAA CTACATAGGC GTCGTCAAAA GTCTGGATCA GGGAAAGACC TGGTCTGCGA TCCAGGAGGT TCCCACCGGT CTGCCGCGCA GTGGTCTCAC CAGTGGACAA GGTGCGACCG AGGTGATGGT GCATCGCGGC AAGTTAACCA TGTTCTTTTC GACGCACTCT GAAACGTGGG GCCGAAACTG GCAATCATGG ATCATGACCA GTCCCAATCA GGGCCGGGCC TGGAGCAAAC CCAGATTGCT GCCAGGACGA TTGGGCCAGT TCACGTTCAT TCGCAACCAC ATCGTCACGA AGGATGGGCG AATTATGGTT CCCTTCCAGC ATTATGAAGG GCCGGGACCA GATGTTCCTC CGCCACCCGC GGAAGATCGC CCCTGGCACA AGGCGCTAAG GCATTATGTG AGCAATCCGC GAAACGGAGT GCTCATCAGC AGTGATCAGG GGGAAACGTG GACAGAGTAC GGCAACATCC GTCTCACCAC AGATGATCGC TACCATGGCT GGGCTGAGAA CAATATCGTC GAGCTGGACG ACGGTACGAT CAAAATGATC ATTCGTGGGG ATCGACTCGG TGGTGTGCTA TACATGGCCG AATCAATAGA TGGCGGCAAG ACCTGGCCAA ATTTTGCTCA AAAAACCGAG ATTCCGAATC CTGGTTCGAA GGCGACCATT TACAAGCTGC GTGATAATGG TGTCGCCATG CTGCATAATC CCAATTCCAG TCACCGCAGT CCCCTTTCCT TATGGGTCAG CTATGATGGG ATGAAAACAT GGCCTTATCG AAGGGTGCTG GTTAAAGAGT CTTCAGATGG CTCTCAGGGG CGACTGAATT ATCCGGATGG GTTTGTCAGC GAGGATGGTT ATCTCCACTT TGCTTACGAC GATAACCGTC ACCGAGCTGT TTATTACGGT GCCAAACTTC CCCAGCTTGC GATTGACGAA AATTCTCCAT AA
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Protein sequence | MPRSRALYIV VSENLKEFTR CLSLLFLGGV CCFLGGQVTL GAETLPGREI LDLSLVPPVI QTHPGPEYSP EQLDYSMTIG IERTSKGRLW AAWVAGGDSE KGFFVLGLSD DDGQTWKSPQ LVIDPPEAPT GLKRRILVGN LWTDPTGRLW LFFDQSMGYF DGRAGNWAIT CDDPDAASPV WSAPRRIWDG CTLNKPTVLK SGEWMLPVSL WDRGKIGPAE LKTAAPELDP YRKANVLVSQ DQGKTWNYRG GVAFPGPQFD EHMIIERKDG TLWMLARTTE GMFESLSQDQ GKTWSQPEMA MPHIPTRFHI RRLASGSLLL VRHGQVDERT KHRTRLMAFL SHDEGQTWGG GLMLDDRGGV SYPDGFQAPD GRIYISYDRE RAKEREVQLA VFREEDVAAG KIVSHDARLQ GVITKAMGGL LESKLPGVKK DPVAQPIDVK LLAMVEGSQG RWKDKALQNA EFDRTTIAYD GITPNKLVCD TTLRQLPDKS WALYLLAGDD IEPSPGNYIG VVKSLDQGKT WSAIQEVPTG LPRSGLTSGQ GATEVMVHRG KLTMFFSTHS ETWGRNWQSW IMTSPNQGRA WSKPRLLPGR LGQFTFIRNH IVTKDGRIMV PFQHYEGPGP DVPPPPAEDR PWHKALRHYV SNPRNGVLIS SDQGETWTEY GNIRLTTDDR YHGWAENNIV ELDDGTIKMI IRGDRLGGVL YMAESIDGGK TWPNFAQKTE IPNPGSKATI YKLRDNGVAM LHNPNSSHRS PLSLWVSYDG MKTWPYRRVL VKESSDGSQG RLNYPDGFVS EDGYLHFAYD DNRHRAVYYG AKLPQLAIDE NSP
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