| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3774 |
|---|
| Symbol | |
|---|
| ID | 9140492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 4854432 |
|---|
| End bp | 4855865 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | NADH/Ubiquinone/plastoquinone (complex I) |
|---|
| Protein accession | YP_003631785 |
|---|
| Protein GI | 296124007 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0888165 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAGGG CTATTCTCGA TCCTACTTCC ATGGCACTGT TGCTGCTGGC TTGGCCGCTG
ATTCTTAACC TGCTGACGAT CATCAAGTCA AAATCGAAGC TCTCATTTTA CTCGATTTCC
ATAATATCCA CCGCTTGTAT GGCGGTCATT GCGGTTCTGC ATGGCCCTGA AAGCGGTTCG
ATTCGTCTGG GTAACTGGAT TTCGTTCTCT CTTGACAGAT CCTCGTGGAT GTTCGTGATT
GTTGTCTATT TATGCTGGAG CGTCACATTA CTCTATTCCG TGGGCTATAT ATCAGCCCAC
CTTTCAAATC AGGCTGAATC ATTTCACAAG TACATGAATG CGACCGTAGG ATTGTCGGTG
GGGGCCGGGC TTTCTGATAA CTTCTTCACA CTGCTATTTT TCTACATTGC GGCGATACCA
ACGATTGTTC CGCTCATTAC TCTCAGAGGG GGAGACGCTG CCCACCGCGC GGCAAGATTC
TATGTCAAAT CAACACTTTG GCCTGTACTG CTCATTGTGC TCCCTGTCGT CGCATGGAAT
TTTCCGCTGG GCACCCCTTT TGAACAGATC AGTATTACAG ACTTCGGGTG GAGCCATGGC
AAAGCGTCCA TCATTCTCGC CCTGATCATT GTGGGGCTTT CGAAGAACTG TGTCGCCCCG
TTCCACTTGT GGCTACCAAC TGTTTCTATC GCCCCGGCAC CTGTGACTGC CATGATTCAC
TCGGTCGCGT CGGTGCAGGT GGGAAGCATC GTGTTATTCA AGATCGCCAA GCATGTTTAC
GGCATGGAAT TGCTTCGTGA ATTGAGCGAT CACTTTCTTG AGACGGGGTG GCTGATTTAC
TTGTGTGGCT TTACGGCCAT CTATACGGCG TATCGAGCGT GGAAGACGCC GGATTTGAAA
GAGCGGTTTT CGTTCTCGAC CGTCGGCCAG TTATCCTACA TTATTACTGC GATTCTGGTC
GGAACGCCGG AGAGCATGCA GGGGGCGATG CTGCACATTA TCACGCACTC GATCGCCAAG
CTGGGATTAT TCTTTTGTGC CGGAGCCTTT CTCACATCAT TTGGAAGTGT CCAGGCCCCT
CAAGTGGCCA ACGCGATTCC CGGTCGGCGG TGGCTCGGCG TGGCGGGTGT GCTCTTTGGA
TTATCCATCA GCGGCTTTCC GTTTTTTGCC GGTTACTATA GCAAGGACAT TATGCTGTTG
GAGGAAGTTC ATCGGCATCA CTACGCCGCT GCAGGATTTT TACTCATCGG TAGTTTTCTC
AACTTTGTCT ATATCTACCC TCTGATCCGT GCGACTATTC GGCGAGCGAC GACAGCGACG
CCCGCCCCGG CTCCGCTGCC TTTCGCCATG GCTGCCGCAA TTGTTACGTG TGTGGCATTT
ATCCTCACGC TTTCGGCAAG TGCATTTTTC TTGATGCGAT TTGTAAGTGT GTAG
|
|---|
| Protein sequence | MVRAILDPTS MALLLLAWPL ILNLLTIIKS KSKLSFYSIS IISTACMAVI AVLHGPESGS
IRLGNWISFS LDRSSWMFVI VVYLCWSVTL LYSVGYISAH LSNQAESFHK YMNATVGLSV
GAGLSDNFFT LLFFYIAAIP TIVPLITLRG GDAAHRAARF YVKSTLWPVL LIVLPVVAWN
FPLGTPFEQI SITDFGWSHG KASIILALII VGLSKNCVAP FHLWLPTVSI APAPVTAMIH
SVASVQVGSI VLFKIAKHVY GMELLRELSD HFLETGWLIY LCGFTAIYTA YRAWKTPDLK
ERFSFSTVGQ LSYIITAILV GTPESMQGAM LHIITHSIAK LGLFFCAGAF LTSFGSVQAP
QVANAIPGRR WLGVAGVLFG LSISGFPFFA GYYSKDIMLL EEVHRHHYAA AGFLLIGSFL
NFVYIYPLIR ATIRRATTAT PAPAPLPFAM AAAIVTCVAF ILTLSASAFF LMRFVSV
|
|---|
| |