Gene Plim_3770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3770 
Symbol 
ID9140488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4847187 
End bp4848944 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content55% 
IMG OID 
ProductOxidoreductase FAD-binding domain protein 
Protein accessionYP_003631781 
Protein GI296124003 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.708524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGAGA TTCAGTTCTG GAAGCTGCTG CTGATTATCA ATGGTCTCAT CCCCCTGGCA 
CTTTTGGGCT GGGATGCGTT ACAGGGTAAA ACCGGTGGCA ACGCCATTGG ACAGGCCATC
CATACCACAG GCTACGTCTC CCTGCTCTTC ATCATGGCGT CCCTCGCTGT GACACCACTT
CGAGTTGTCA CGGGTTGGAC GACCCCGGTC GCCTTTCGTC GTATTCTCGG GTTGTTTGGC
TTCTTCTATG CGGCCATTCA CTTCGGAATT TACTTTGGAT TTGATCGCGC TTTGAGCCTG
TCGAGTACCT TCGACGAAAT CGCGAAACGC AGGTTCCTAC TTGTAGGCAT GACCGCACTG
ATGCTCATGG TCCCCCTGGC TGTCACTTCC ACAAACGCCA TGATCAATCG ACTCGGCGGC
AAACGCTGGA AGCTCTTGCA TCGCACAGCC TACATCGTAG GAGCACTGGC CGTCCTCCAT
TACTTCATGC AGGTGAAAGC CGATATTCGC CAGCCCCTCG CCTTTGCTGT TGTCCTGGGC
GCCTTTCTGC TCATGCGTCT TCCTTTGAAA AAGCTCCTGC AAACTTCCAA GTCTCACTCT
CCCGTCCACA CCTCCGTCAA ATCACCAGCC ACTGCGACAG GTCGGCCCAG GTTCTGGACA
GGTGAACTCA AGCTGGCGCG TGTCTTTCAC GAAACTTCTC TTGTAAAGAC CTTTCGCTTC
GTGGCTCCCG ATGGCAACAA CCTGCCGTTT GCCTTTGAAC CCGGACAGTA CCTGACATTG
AAAGTACTCA TCGACGGAAA GTTCGTCAGT CGCTCGTACA CCATCGCATC ATCCCCCAGC
CAATCGGGCT ATTGCGAAAT CTCTGTCAAG CGGGAGGAAC ATGGCCTCGT CTCGCGGTAT
CTGCACGAGC ACCTGCAAGA AGGCGATCTT CTCTCAATAT CGGCACCAGG TGGAAAGTTC
TTCTTCAATG GTCGCCAGGC GAAAAGTGTC GTTTTCATCT CGGGTGGTGT GGGAATCACA
CCTCTCATGT CGATGACTCG TTACCTCACC GATACCTGCT GGCCCGGCGA AATCCACTTT
CTCGTTGTCG ATCGATCACC CAAAGATTTG ATCTTTTACG ACGAATTGCG ACATCTGGCC
CATCGATTTC CCAATCTTCA TGTGGCCGTC ACATTGACTC GATCTCCAGA GATGGATGAT
TGGATGGTGC CGGATGGCTG GCGGCGAGGT GAAGGACGGA TCAATACCTC GTGGCTGCGC
GAATGCCTGC ACGATTGGCC CCAGCGCCAG GTCTATCTCT GCGGCCCCGA CGCCATGATG
GATGCCACTC GTGAGCTTCT GACTGAACTT GGAGTCCCTG CCGAGCAGAT CTTTACCGAA
GCCTTCGTCT CACCAGCTGC ACAAAAAGAG GCGACTGAGA TTCTGCCTGT GGAGTCTCCA
GCCAATACCA CAGCGACCTC CTCACGCGAA CTCACCACGC ACTCCGCAAC TCCGGGCGAG
TTTCAAGCCA CCTTGCAATC GTCCCGGCAA ACCATCGAAT TGAGTGGCTA CAACAATCTG
CTCGAAGCGG CTGAAGCCGC GGGACTCGAC TGGCCCTACG ATTGCCGCTC CGGTGTTTGT
GGCCAGTGCC GTGTGCGACT CATCAGTGGC GAAGTCGTGA TGGATGTCCA CGAAGCTCTT
ACGCCACAGG AACGAGCACA AGGCCATATC CTCCCCTGCC AGGCCCGCGC CTTCAGCCAT
CTGGTGATTG AGGCCTGA
 
Protein sequence
MSEIQFWKLL LIINGLIPLA LLGWDALQGK TGGNAIGQAI HTTGYVSLLF IMASLAVTPL 
RVVTGWTTPV AFRRILGLFG FFYAAIHFGI YFGFDRALSL SSTFDEIAKR RFLLVGMTAL
MLMVPLAVTS TNAMINRLGG KRWKLLHRTA YIVGALAVLH YFMQVKADIR QPLAFAVVLG
AFLLMRLPLK KLLQTSKSHS PVHTSVKSPA TATGRPRFWT GELKLARVFH ETSLVKTFRF
VAPDGNNLPF AFEPGQYLTL KVLIDGKFVS RSYTIASSPS QSGYCEISVK REEHGLVSRY
LHEHLQEGDL LSISAPGGKF FFNGRQAKSV VFISGGVGIT PLMSMTRYLT DTCWPGEIHF
LVVDRSPKDL IFYDELRHLA HRFPNLHVAV TLTRSPEMDD WMVPDGWRRG EGRINTSWLR
ECLHDWPQRQ VYLCGPDAMM DATRELLTEL GVPAEQIFTE AFVSPAAQKE ATEILPVESP
ANTTATSSRE LTTHSATPGE FQATLQSSRQ TIELSGYNNL LEAAEAAGLD WPYDCRSGVC
GQCRVRLISG EVVMDVHEAL TPQERAQGHI LPCQARAFSH LVIEA