Gene Plim_3719 details

Gene Information

• Locus tag: Plim_3719
• ID: 9140437
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 4780844
• End bp: 4783021
• Gene Length: 2178 bp
• Protein Length: 725 aa
• Translation table: 11
• GC content: 55%
• Product: protein of unknown function DUF1549
• Protein accession: YP_003631730
• Protein GI: 296123952

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTACGA TTGCCCGCGC TCATCATCGC GATTATTGCG ACAGATCGGA ACTTCCAGAG 
ATTTTAACGA TACCTGATTG TCGTGCCGTG TGTTTCTCTC ATAGCCTGCG GGTATCAGTC 
GATCTGAAAA CCTGTGGCAC GAAGATAATC ATTCAACGTG GTGTTCATCG GGGCGGAAAC 
ATGAAGACGA GCCTTTCATA TGTGGCAGTT GATCGAACTT CCACTCAGGT TCCACGATGC 
TGCTCAGGGA TCCAATCGAT TCGCAAGATC GTGAGTTTAT TGTCGCTGGC AGTTTGTCTC 
TCAGTTCTGA GTGACGATAT CTTTGCTGCC GACAAACCAC GGGTGATTTC CCCTGCCGAA 
AAGCCTTCGA TTTCCGAAAT CAGCCGCCAG ATTGATGCGT TCCTGCAGCA GGAGTTTGAC 
AAAAAGGGGA TTGCGCCATC GGCCATCTGC AGTGATGAAG ATTTCCTCCG CCGGGCGACG 
ATGGATATCG CTGGCCGGCT GCCCACTCCG GAAGAGATTC GCGAGTTCCT TGCCAACAGC 
GATGCCGAAA AGCGGGCCGA GATCGTGCAG TCGCTCCTGG CTGAGCCAGC CTATGCCTCT 
AACTGGGCTC GCTATTGGCG GGATGTCATC TTCATGAATG CGACCAATGC CCGGGCCCGG 
TTTGCCGTCA AGCCTTTCGA AGACTGGATG ACAGCCGAAC TCAATCGCAA TGCGAGCTGG 
GATGAGATTG TGACACAACT CATCACCGCA ACTGGCGATG TCTACGAGAA TGGCGCCACG 
TCTCTCTTCT TTGCCCATGA TGCCGAGCCT GAAGAAGTGG CTTCGGAGAT CTCGCGGATC 
TTCATGGGAG TGCAGATGTC GTGTGCGAAT TGCCACGATC ATCCTTCGGA TATCTGGAAG 
CGTCGGCAAT TTCACGAACT GGCCGCCTTC CTCCCTCGCG TGAATTTGAA GCAAGACCTT 
CAGGCCATGC CACCCAAGTT CGAGCTGGCT TCGATTCAGG CGAACGAACG TCGTGGGACG 
GATTTTCTCA AAGAGAATCC TGAGATGATC TTTCAGGCAC TCGATCGCAA TCGCGACCGT 
AAGATCAGCG AGGAAGAGTC CAAAGGGGGC CGTGGCCAGT TCGCCCGTGT CTTTCCCCGA 
TTGATCGAAT ACGGCGACAC CAACAAAGAC GGCATGATCT CACTGGCCGA AATCAAGTCT 
GTTCAGGTAC CTGAGCGACC TGGGCAGGGG AGTATTGAAT ACTATATGCC TAACCTGGAT 
CGGCCCGCCG AAAAGGGAAC GCTGATCCAT CCCAAGTTTT TCGTCAATGG CCGAGCCCCC 
GGCAAAGAGC TGGACGACCA GGAACGACGC CAGGCTCTGG CGGGTTTCGT GACCGCACCT 
CAGAACGAAT GGTTCTCGAA AGCCGTGGTG AACCGTGTCT GGCATGAAAT GCTGGGCTCC 
GCCTTCTACA TGCCCGTCGA CGACATGGGC CCATCGCGAA GTGCAGTCCA TCCCCAGGCG 
ATTGAAGCTC TGGCTAAGGC CTTCACCGAA TCGGGCTACG ATCTCAAATG GCTGGTCGGC 
ACAATTGCCA GTACCAGCGC CTATCAGCGA TCTTTGCGGA ACAGTTCTAG CAGCCAGCCG 
GAAGTTCCCT TTGCGGCGGG TCAGCCCAGT CGCTGGCGGG CTGATCAACT CTTCTCGGCA 
ATGTCGTCGG CTCTGGGCAT GCCTGAAGAA ACACGTATGT CACAAGCCCC TGGGATGATG 
GGGCGCCTCG CCATGCGGAA TTCGCCACGC ACACAGTTCA CACAGCTGTT TGGATTCGAT 
CCTTCGATTC CTCGGGAAGA TCTGACTGGC ACGATCCCTC AATCTTTGAT GCTCATGAAC 
AGTCCCACCG TCAACCGGGC TGTCGAACAG CAGATTCGCA GTGCCATCAC TGGTGATGAT 
ACTCCCCTCG AACGTGGCTT TGCCGCCGTG GCCCGGAATC GTTTTGGTAA TAATCCACCG 
GCAGGCCGCA ATTCGACGAT CACTCTCAAT CGTGCTGCGG TGGAAGAACT CTATCTGAAG 
ACCCTGGCTC GTAAGCCCAC AGAAGCCGAA TTCAAAATGA TGCGGGCTTA TGTCGATGAG 
CATGGCAACA ATCCCGAGGC TGCTGTCGAT CTCCTCTGGG CGCTCATTAA CTCGACTGAG 
TTTCTATCGC GACGGTAA 

 

Protein sequence

MPTIARAHHR DYCDRSELPE ILTIPDCRAV CFSHSLRVSV DLKTCGTKII IQRGVHRGGN 
MKTSLSYVAV DRTSTQVPRC CSGIQSIRKI VSLLSLAVCL SVLSDDIFAA DKPRVISPAE 
KPSISEISRQ IDAFLQQEFD KKGIAPSAIC SDEDFLRRAT MDIAGRLPTP EEIREFLANS 
DAEKRAEIVQ SLLAEPAYAS NWARYWRDVI FMNATNARAR FAVKPFEDWM TAELNRNASW 
DEIVTQLITA TGDVYENGAT SLFFAHDAEP EEVASEISRI FMGVQMSCAN CHDHPSDIWK 
RRQFHELAAF LPRVNLKQDL QAMPPKFELA SIQANERRGT DFLKENPEMI FQALDRNRDR 
KISEEESKGG RGQFARVFPR LIEYGDTNKD GMISLAEIKS VQVPERPGQG SIEYYMPNLD 
RPAEKGTLIH PKFFVNGRAP GKELDDQERR QALAGFVTAP QNEWFSKAVV NRVWHEMLGS 
AFYMPVDDMG PSRSAVHPQA IEALAKAFTE SGYDLKWLVG TIASTSAYQR SLRNSSSSQP 
EVPFAAGQPS RWRADQLFSA MSSALGMPEE TRMSQAPGMM GRLAMRNSPR TQFTQLFGFD 
PSIPREDLTG TIPQSLMLMN SPTVNRAVEQ QIRSAITGDD TPLERGFAAV ARNRFGNNPP 
AGRNSTITLN RAAVEELYLK TLARKPTEAE FKMMRAYVDE HGNNPEAAVD LLWALINSTE 
FLSRR