Gene Plim_3716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3716 
Symbol 
ID9140434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4778295 
End bp4779359 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content60% 
IMG OID 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_003631727 
Protein GI296123949 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAACC TCAGCCGCTA TCACCGTCAG ATGCTGTTGC CACAATTTGG AACAACTGGA 
CAAGAGCGCC TCTCAAGGGC CGTGGTCGCC ATACTGGGCA TGGGGGCCCT GGGAAGCTGC
GCCGCCGAAC TCCTGGCTCG CGCTGGCGTG GGAACGTTAC GCCTGATCGA CCGCGACTTT
GTCGATCTGA CGAACCTCCA GCGGCAATCG CTCTACGACG AAACCGACGC CCGCGAACGC
ATCCCCAAAG CCATCGCAGC GGCCCGCCGT CTGGGCGAAA TCAATCACGA GATCACTCTC
GAACCCATCG TGGCCGACAT CCGCCCCGAG AACATTCTCG AACTACTGGC AGGCGTCGAT
CTGGTCGTCG ATGGAGCCGA CAACTTCGAA CTCCGCCTCC TCCTCAATGA TGCCGCTCTC
GAACGAAACC TCCCCTGGGT GCATGGAGGC TGTGTCGGCA CCAGTGGCCA GGCCATGGCC
TTTCATCCGA CTCACACACC CTGCTTTCGC TGCCTCGTCA ACCCGGTCGA TGACGACGCT
TCCGGGCAAA CGTCCTCGTC AGCCACCACC CCCGCCACAT GCGATGCCGT CGGTGTCGCA
GGGCCAGCTG TCCATCTCGT CGCTTCCCTC CAGGCCATGA TGGCAATACA GATCCTTCTG
GGCGAGAGAG AAGTGCTCGG CTCACAATTG AAGCTGATCG ATGCCTGGAG TGGTCAGATC
CGCTCGATGG ACCTTTCAGG TTTACGCGAA ACGAACGATT GCCGGGCCTG CCAGCAAGGC
GAGCGATTGT GGCTCAGTGG CCAGCAGACG TCACAAACAA CAGTGCTTTG CGGCCGCAAT
GCCGTACAAA TCAGCCCTGC CCATCCCCGC CCGCTCGATC TCAATCTGCT GGCCAATCAA
CTGGCTCCCC TGGGCGATGT GCGACCAAAC CCCTATTTAC TCCGCTTCAA ACCCACCGGC
CACAACTGCG AACTTACCAT CTTCAGAGAT CGCCGCGCCT ATATCGAAGG CACCGAAGAC
CCCACCCTCG CCCGAACACT CTACACGCAG TTTCTGGGGG ATTGA
 
Protein sequence
MPNLSRYHRQ MLLPQFGTTG QERLSRAVVA ILGMGALGSC AAELLARAGV GTLRLIDRDF 
VDLTNLQRQS LYDETDARER IPKAIAAARR LGEINHEITL EPIVADIRPE NILELLAGVD
LVVDGADNFE LRLLLNDAAL ERNLPWVHGG CVGTSGQAMA FHPTHTPCFR CLVNPVDDDA
SGQTSSSATT PATCDAVGVA GPAVHLVASL QAMMAIQILL GEREVLGSQL KLIDAWSGQI
RSMDLSGLRE TNDCRACQQG ERLWLSGQQT SQTTVLCGRN AVQISPAHPR PLDLNLLANQ
LAPLGDVRPN PYLLRFKPTG HNCELTIFRD RRAYIEGTED PTLARTLYTQ FLGD