| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3682 |
|---|
| Symbol | |
|---|
| ID | 9140400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 4735336 |
|---|
| End bp | 4737024 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | flagellar basal body FlaE domain protein |
|---|
| Protein accession | YP_003631693 |
|---|
| Protein GI | 296123915 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCTGA CTTCTGCTCT GAATACGTCG CTGAACGGCC TTTCTCTCAA TGAAGTGACC
ATTGACGTAC TTGGCAACAA TATTGCCAAT GCCGGTACGA ATGGTTTCAA AGCTTCGACC
GTTCGCTTTC AGACTCAGTT GGCTCGTACG CTGTCGATTG GTTCCCGACC GACTGCTACT
GATGGAGGAA GTAACCCTCG GCAGGTGGGC CTCGGAGCGA CGACTTCCGC CATCAGCAAA
GACTTTACCC AGGGCAGCCT TTCGAACAGC ACCAGTGCTT CGGATCTGGC GATTCAAGGG
GAAGGCTTCT TTGTGATGGA TGGTTCCAGC GGCAGGACCT ACACCCGTAA CGGGAACTTT
CTTCGCAGTA GTGACAGTTA TCTGGTCAAC GATCAGGGCC AGTTTGTTCA AGGCTATGGG
ATTGACGATG AATTCAACAT CGTCACGACG CAATTGTCAC CATTGCGGAT TCCCCTGGGT
GAGTTGAACG TCGCCCAGCG CACTTCGCAA ATCACGATGG GTGGAGCACT GTTTCCCGCA
GGAGACTTAT CGACTCAAGG TGCTCTGGTG AACAGTGAAG TCCTGACAGA CAGTGTCACA
GGACTCCCCG CAACGGGCAC CGCTTTACTG AGCAACGTGG AGAACGCGGG AGGAACCAAC
TACTTCAATG TCGGAAATAC TTTAACTTTT GCACCTCGCA AGGGGGGACG AGTTGTCGAA
GAGCAAACGT TCACAGTGAC TGCCACTTCG ACCCTGGCCG ACTATGTCAC CTTCATGAAT
AACACGCTCG GCATTCAGAG TGGTGCGGGG ATACCTAACG ATGCCACAAC GGGCGGACAA
CCGGGAGTGA CGCTTACGGG TGGTCAAATT CAAGTCGTGG GCAATACGGG TACCCAGAAC
GACATCAGTA TTACTGCGGG AGACATCAAG AGTAACGGTG CTGTCGTTCC CCTGAGTTTT
ACCAAGTCGG AATCGAGCAA TGGGGAGAGT GCTGCGACTG AATTCATCGT CTACGACTCT
CTGGGTCAAA CCGTCAATGT GCGTATGACC TCAGTACTGG AAAGCCGCGG GCCGGGAGCG
ACGACATTCC GTTACTTCCT GGAAAGTGCT CAGGACAGCC GACCTGGTGT GGCGATTGGT
ACGGGTCTGA TCACCTTCGA CAGTGATGGA AAAATCACGG GTGACACGAC GCAGATGTTC
ACACTCGAGC GTTCGGATAC CGCCGCCGTC AGCCCGATGC AGATTGAAAT GGATCTTTCG
CAGATCAGTG GAATCTCGTC TGCACAATCG GGCAGTGCTT TGAACCTTTC CAATCAGAAT
GGTTCCAAGC CTGGAACGTT GCAAAGCTAT GTGATTGATG AGCAGGGTTT GATTAACGGG
ATCTTTGACA ATGGCTTGAT CCGTTCACTC GGTCAGGTGG TACTGGCCCG GTTCGCCAAC
TCGGATGGTT TGCTCGAAGC GGGTGGCACG GCGTTTCGTG AGGGTGTCAG CTCCGGAGTG
CCTCAGATTG TGTCACCGGG TTCATTCGGA GCGGGCACGA TTGCCTCAGG AAAGATTGAG
CTTTCGAACA CGGATATTGG TCGCAACCTC GTCGATCTCA TTGTGGCCTC TACCAATTAC
CGTGGGAATG CCCGAGTGAT TTCTTCAGTC CAGGATCTGA CCAACGAGTT GCTGCTGTTG
GGTCGATAA
|
|---|
| Protein sequence | MGLTSALNTS LNGLSLNEVT IDVLGNNIAN AGTNGFKAST VRFQTQLART LSIGSRPTAT
DGGSNPRQVG LGATTSAISK DFTQGSLSNS TSASDLAIQG EGFFVMDGSS GRTYTRNGNF
LRSSDSYLVN DQGQFVQGYG IDDEFNIVTT QLSPLRIPLG ELNVAQRTSQ ITMGGALFPA
GDLSTQGALV NSEVLTDSVT GLPATGTALL SNVENAGGTN YFNVGNTLTF APRKGGRVVE
EQTFTVTATS TLADYVTFMN NTLGIQSGAG IPNDATTGGQ PGVTLTGGQI QVVGNTGTQN
DISITAGDIK SNGAVVPLSF TKSESSNGES AATEFIVYDS LGQTVNVRMT SVLESRGPGA
TTFRYFLESA QDSRPGVAIG TGLITFDSDG KITGDTTQMF TLERSDTAAV SPMQIEMDLS
QISGISSAQS GSALNLSNQN GSKPGTLQSY VIDEQGLING IFDNGLIRSL GQVVLARFAN
SDGLLEAGGT AFREGVSSGV PQIVSPGSFG AGTIASGKIE LSNTDIGRNL VDLIVASTNY
RGNARVISSV QDLTNELLLL GR
|
|---|
| |