| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3673 |
|---|
| Symbol | |
|---|
| ID | 9140391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 4724686 |
|---|
| End bp | 4725705 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003631684 |
|---|
| Protein GI | 296123906 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCAC ACAGAAATGA ACTCAACGCC ATCGCCCCGA TAAAGTCGAA ATCTATGGGT
GCATCGCCAA CGAGCCTGTC AGCCGCCATT AGCGTCGAGC ATGTCTCCTT CAGTTATCCC
TCGCGGAAAG AAACTCCTCC GGCACTGAAC GACGTTTCTT TTCGCGTGGA CGAAGGCCAG
ATCTGTGCGC TGCTCGGCCC CAATGGCAGT GGCAAATCCA CGCTCTTCAG GCTGTTGGCC
ACACTCCTTC CCTGGCAACA GGGAACCGGT CAGATCTTTG GCGTCGATCT CGCGCACTCA
CCGCAGAGAG CCAGGCGACT CTTTGGCGTC ACCTTCCAAT CCCCCAGCCT CGATACCCGA
TTGACTGTCG AAGAAAACCT CTGGCATCAA GGCAAGCTCT ACGGCCTCAA CTCGGTCGAT
CTGCAACAGC GAATCATCGA ATGCAGCACA CCGCTGGGAT TAAAGGACTG GCTCCCTAAG
ACCGTCGAAA CACTTTCTGG CGGCTGGAAG CGTCGTGTCG AACTGGCCAA AGCTCTGCTC
CACCATCCCC GCCTGCTCCT CCTCGATGAA CCCAGTGTCG GGCTCGATCC GGGCAGTCGG
CGTGAACTGT GGCAGGAACT TGCCAGGCTC CGCCAAATGG GGATCTCCAT CCTCGTCAGC
ACGCACCTGA TGGAAGAAGC CGAACTCGCC GACCAGGTCG TGATCTTCGA CGAAGGGCAG
AAAGTGGCCG AAGGCTCTCC CGATGAACTC ACACAATCCG TCGGGCAGGA TGCACTCTCG
ATGACTCCTC GTAACCCCGA GACGTTTGCC GAAATTCTAC TTCAGAAAAC AGGCCGCAAC
GCGCTCCGCA TGGGCTCTTC ATTCCGACTC GAAGGACAAA TCTCGCCAGG TCTTGTCGAA
GAACTCGCCA CCAGCTTAGG CCCCGAACTC CGCGCCATCG GCCTCATCCG CCCCACACTC
GAAGAAGTCT TCCTCAAAGT CACCGGCAGA ACCTTCGAAT CCGCCGATCA AGAGGACTAA
|
|---|
| Protein sequence | MSSHRNELNA IAPIKSKSMG ASPTSLSAAI SVEHVSFSYP SRKETPPALN DVSFRVDEGQ
ICALLGPNGS GKSTLFRLLA TLLPWQQGTG QIFGVDLAHS PQRARRLFGV TFQSPSLDTR
LTVEENLWHQ GKLYGLNSVD LQQRIIECST PLGLKDWLPK TVETLSGGWK RRVELAKALL
HHPRLLLLDE PSVGLDPGSR RELWQELARL RQMGISILVS THLMEEAELA DQVVIFDEGQ
KVAEGSPDEL TQSVGQDALS MTPRNPETFA EILLQKTGRN ALRMGSSFRL EGQISPGLVE
ELATSLGPEL RAIGLIRPTL EEVFLKVTGR TFESADQED
|
|---|
| |