Gene Plim_3649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3649 
Symbol 
ID9140367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4694847 
End bp4695926 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631660 
Protein GI296123882 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGACG AACTCCCACT CCCGATTGCG GGTGAAGCCG AAGAACACAC GCTGATTTCC 
GAACAGGAAC CGGAGATTGG TGGCAAGTCG GCGTTTCTCG CGCAGATTCG CGAAGTGGCC
GACAAGCTGG CACACGATCA GGCCACGCGC GGTGATATCA AAATTATTGC CCGGGCCGCT
AAAGAACTGC GCTACGCCTT CAAGGTCTTT ACCCCCTATC GACTCCATCG CAAGGTGACG
GTTTTTGGTT CGGCCCGCAC TCCGGCCAAT CATCCCGATT ATCTTTCATC GGTCGAGTTT
GGCCGCCTGA TGGCCAGGAA CAACTGGATG GTTTTAACAG GCGCAGGTAG CGGCATCATG
GAAGGTGCCC ATGTCGGCGC CGGTTTACCG ATGTCGATGG GTGTGAACAT TCTGCTCCCC
TTTGAGCAAC AGGCCAATTC GGTCATTGAT GGTGATCCGA AGCTGGTCAC GTTTCGATTT
TTCTTTACCC GTAAACTGAT GTTCGTCAAA GAAGTCCATG CCATCGTGGT CTATCCCGGG
GGCTTCGGAA CACTCGATGA ACTCTTTGAA ACACTCACGC TGATCCAGAC CGGGAAGCGG
GACATGCTCC CCATCGTGCT GGTCGATCAG CCCGATTGCA ATTACTGGTG TGCTCTGCAG
GACTTCATTC GTCATCAACT TCTGGAGCGG GGCCTGATTT CACCGGCTGA TCTCTCGCTC
TACCGGATCG TCCATTCGCC AGCAGCAGCC GTCTCTGAAG TGCTGAGTTT TTACCGTGTC
TATAACAGCA TGCGCTTCGT CAAACAGAAT CTGGTACTCA GGCTGAACCA CCCCATCAGC
GATGAACTGC TGGATCAGTT GAATGTCGAG TTTGCCGATC TGCTCATTTC AGGCAGGATC
GAGCGAACAG CGGCCCATCC GTTTGAAGCG GACGAGCCAC ATTTGAAAGA TCTCCCCCGC
TTGCGCTTCC ATTTCGAGCG GCGGGAAACT GGCCGCCTTA GGCAAATGAT CGACGCCCTC
AACCTTTCGC CAGAACTTCC GACACCAGAA CTTTCCCCTC AGCAGCCATC TTTATCGTGA
 
Protein sequence
MEDELPLPIA GEAEEHTLIS EQEPEIGGKS AFLAQIREVA DKLAHDQATR GDIKIIARAA 
KELRYAFKVF TPYRLHRKVT VFGSARTPAN HPDYLSSVEF GRLMARNNWM VLTGAGSGIM
EGAHVGAGLP MSMGVNILLP FEQQANSVID GDPKLVTFRF FFTRKLMFVK EVHAIVVYPG
GFGTLDELFE TLTLIQTGKR DMLPIVLVDQ PDCNYWCALQ DFIRHQLLER GLISPADLSL
YRIVHSPAAA VSEVLSFYRV YNSMRFVKQN LVLRLNHPIS DELLDQLNVE FADLLISGRI
ERTAAHPFEA DEPHLKDLPR LRFHFERRET GRLRQMIDAL NLSPELPTPE LSPQQPSLS