Gene Plim_3644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3644 
Symbol 
ID9140362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4685608 
End bp4686624 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content58% 
IMG OID 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003631655 
Protein GI296123877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTTATC TGCTGTTTCT ACTGATCTGC ACTGTGTGGG GGGGCAGCTT CATCCTGATG 
AAGAAGGCCA ATCCTGTCCT CGAAGCGATC ACGATTGGTG GTTGGCGTGT GGCGGGTGGT
GCCATCGCAC TGGGGTTGAT TTTCTGGTGG CTCGGCCCAT CTCGAACGCT TCGGAGAAAA
CATCTGGGGG CACTGGTCAT TGTGACCTTT CTCGGATTCA CCTGGCCTTA TGTGGTGCAG
CCGTGGCTGG TCGAGCGGAA TGGCAGTTTT ATCGTGGGTG GGAGTGTGAG CCTCAATCCA
CTGATGACGA TCTTCATTGC CATACCACTT CTGGGTGTCT GGCCCACCCA GCGGCAATTC
TGGGGTGTGC TGGCTGCTCT TTCGTTTCTC ATTGTGCTCT TCGCTGGCGA GATTCATAAG
AACCTGCCAC TGCTCGACCT GGCTGTACTG ATTTCAGTCC CCTTAGGTTA CGCCTTCTCG
AATGTCATCA TTCGCCGCAC GATGAAGGAT GCGAATCCTC TCGAATTGAC ACTGGTCGCA
CTGGCTGCCG CTGCAATCAT CCTGTTGCCA CTTGCCTGGT TCACCGAATC TGCGGCCCCG
GATGCCACCC GGATCGACTG GATCACCGCG ATTGGTGCTG TGGCGATCCT CGGTGTCGCA
GGAACGGGAT TGGCCATGTA TGGCTTTAAC ATTCTCATTC GCGATCAAGG CCCGCTGTTT
GCCGGGATGG TGACGAACCT CGTACCACTC TGGGCCTTTT ACTGGGCCTG GCTCGATGGA
GAACCACTCA CTTTGTTGCA ACTGGTCTGT GTGGTTGGTG TGCTGGGCTC GGTTCTCGTC
GTGCAGTATC GCGCTGCTGG TGCGAAGACA CCTGCTCACC CTCCGGTTGC GGCACCCGCC
ATCCCTCCAC TCGAAGTCAC AGACGAAGCA ACAGAACTGG TCACAGTCCG CAGCGTACCG
ACCAACACGC TGGCCCCCGC GCGGGAGCAG ATTGCGGCTG GTGGCGAAAA TGGCTGA
 
Protein sequence
MPYLLFLLIC TVWGGSFILM KKANPVLEAI TIGGWRVAGG AIALGLIFWW LGPSRTLRRK 
HLGALVIVTF LGFTWPYVVQ PWLVERNGSF IVGGSVSLNP LMTIFIAIPL LGVWPTQRQF
WGVLAALSFL IVLFAGEIHK NLPLLDLAVL ISVPLGYAFS NVIIRRTMKD ANPLELTLVA
LAAAAIILLP LAWFTESAAP DATRIDWITA IGAVAILGVA GTGLAMYGFN ILIRDQGPLF
AGMVTNLVPL WAFYWAWLDG EPLTLLQLVC VVGVLGSVLV VQYRAAGAKT PAHPPVAAPA
IPPLEVTDEA TELVTVRSVP TNTLAPAREQ IAAGGENG