| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3643 |
|---|
| Symbol | |
|---|
| ID | 9140361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 4684299 |
|---|
| End bp | 4685477 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003631654 |
|---|
| Protein GI | 296123876 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTTC CACTTTTGCC CCTCAGCTAT TGCACCAATG TTCATCCGGC TCAGACTCTC
GCTGAAGTGA TTCAAGGTCT TGATACCTTC GCCCTTCCTA TTCGCCAGGC CAGTGGTGGC
GAACTCGCCG TCGGCTTATG GCTGCAAGCC ACCATCATCG ATGAGTTACT CGCTACGCCC
CAGGCTCTCG AAGAACTTCG CGCGGCGCTT TCCTCACGAA ATCTCATCTG CTACACACTC
AATGCCTTCC CTTACGGAAA CTTTCACTCC GAGCGCGTCA AAGATCAGGT CTATCTTCCC
AACTGGTCGT CTCCGCAGCG GTACGATTAC ACCTTGAATT GTGCCCGCAT TCTTGCGGCA
CTGCTCCCCG AAGATCTGCA AGGGAGCCTG TCAACATTGC CACTCGCGTT CAAGCCGCAT
GAACCCACGG GTGATTTTAC GAGCATTTGT ATTCGTCAAT TACTCGATCT GGCCATGGCC
CTCGATGACC TGCATGATTC CACTGGCCGC CTGATTCGGC TGGCGATTGA ACCTGAACCA
CTCTGCCTGC TGGAAACGAC CGATGAGGCG ATTGCCTTTT TCGAGCAGTT GTTTCGTCAG
GCGGAAGAGA AGGGCGTGCT CTCTCAGGCC AGAACGCATC TGGGGCTGTG CTACGACGTC
TGCCATCAGG CGGTTGAATT CGAACCAGCC GATCAGGCCA TTCATGCCAT TGAACGAGCC
GGTATTCGCA TCAACAAGGT TCACTTAAGC TGCGCCATCG ATGCGAGGCA ACCCCTCACC
CCCGAAGTTC AGGCGGCTCT TAAAAGCTAT ATCGAGCCGC GTTACCTGCA CCAGACGATC
GCCCGCTGCA TCTCGGGCGA CCGGCAGGAG AGTGGCTTCA TTCGCCAGGT CGATCTGACG
GAAGAATTTC TGGCAGCACC ACCACTCGAA TTCCAGCAGG CCGAGAGTTG GCGCGTGCAT
TACCATGTGC CCATCTCGGA AGTTTCGATT GGCCCGCTCT TCACGACGAG GCCGGATCTT
GAAGCGGCTC TTAAAGCCGT CGAGGCTCTT CCCTACGCCC CGCACTTGGA AGTGGAAACC
TACACCTGGA ATGTCCTCCC GGGACAACCC CGCACGGAAG CGATCATCGC GGGCCTGGGA
AAAGAACTCG AAACGGCCCG AGGGTTAGTT GGTATGTAA
|
|---|
| Protein sequence | MTFPLLPLSY CTNVHPAQTL AEVIQGLDTF ALPIRQASGG ELAVGLWLQA TIIDELLATP
QALEELRAAL SSRNLICYTL NAFPYGNFHS ERVKDQVYLP NWSSPQRYDY TLNCARILAA
LLPEDLQGSL STLPLAFKPH EPTGDFTSIC IRQLLDLAMA LDDLHDSTGR LIRLAIEPEP
LCLLETTDEA IAFFEQLFRQ AEEKGVLSQA RTHLGLCYDV CHQAVEFEPA DQAIHAIERA
GIRINKVHLS CAIDARQPLT PEVQAALKSY IEPRYLHQTI ARCISGDRQE SGFIRQVDLT
EEFLAAPPLE FQQAESWRVH YHVPISEVSI GPLFTTRPDL EAALKAVEAL PYAPHLEVET
YTWNVLPGQP RTEAIIAGLG KELETARGLV GM
|
|---|
| |