Gene Plim_3624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3624 
Symbol 
ID9140342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4660702 
End bp4661553 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content48% 
IMG OID 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_003631635 
Protein GI296123857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAACT TTGGGTTCTG GAATACCTAT CGCAAATCAC TCGTTGAGCC AGTCATCGAG 
TGGGTTCATG AATTCGAACT GAATATTGTG CTTTTGGCGG AATCGACTCT TTCGTCTCAA
TCTCTGGCGG AAATGCTGTC CATTTCGTCA GGGCAAGTTT GGAGTTATCC GAAAAATCCC
ATTCGTCGAT TTTGTGTGGC GTATCGAGAG CCTCTGCTAT CTTTTGAACC AGTGTATGTC
GACCGGAGTG AGCGTGCCCC GTTACTCGAA CTTCGCACTG GCCATGAAAC GCTTCTGATC
GCACTGGTCC ATCTGCCCTC ACTGCTGCAC CGTGACGAAA CCGATCAGGA TATCATCATC
TCAGATCTCA TCAGCCGTAT CGACGAGCAA GAGAAGTTCG CAGGTCATTC CAGAACGATG
GTGATTGGCG ACTTCAATTT GAATCCGTTC TCCCGGCAAG TCATCGGCGC TAACGGGCTG
CATGCCACCA TGTCTCGCCA ACTGGTGAAA AAAGGCTCAA GAACAGTTGA CGGTAATGAG
CGAAAAATGT TCTACAATCC CATGTGGCGA TTTCTCGGAG ATGATGGCGA ACATCCACCC
GGCACCCATT TTTACAGATC ATCGACATCG AATGCCTATT TTTGGCATGT GTTCGATCAG
GTACTCTTGA GAAATGAACT GACAGATCGA TTGGTTGACC TGAAGATTAT TACAAAGCTC
AACTCCTTCA GCTTGCTGAA TGACTCTGGG CAGCCAGATC GCGAAAATTT TTCTGATCAC
TTTCCTGTTG TCTTGAAATT AGCATCGCCT GTTTCCCAAG AGGCCCCACA TGGCAACTTC
GCAAATTCCT GA
 
Protein sequence
MLNFGFWNTY RKSLVEPVIE WVHEFELNIV LLAESTLSSQ SLAEMLSISS GQVWSYPKNP 
IRRFCVAYRE PLLSFEPVYV DRSERAPLLE LRTGHETLLI ALVHLPSLLH RDETDQDIII
SDLISRIDEQ EKFAGHSRTM VIGDFNLNPF SRQVIGANGL HATMSRQLVK KGSRTVDGNE
RKMFYNPMWR FLGDDGEHPP GTHFYRSSTS NAYFWHVFDQ VLLRNELTDR LVDLKIITKL
NSFSLLNDSG QPDRENFSDH FPVVLKLASP VSQEAPHGNF ANS