Gene Plim_3622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3622 
Symbol 
ID9140340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4658226 
End bp4658999 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content55% 
IMG OID 
Productprotein of unknown function DUF224 cysteine-rich region domain protein 
Protein accessionYP_003631633 
Protein GI296123855 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCGTG TTGGTTTGTT CATCCCCTGT TATATCGATC AGATCTACCC TGATGTCGGC 
CTCGCCACTT GCGATGTGCT GGAGCGGTTT GGCTGCGAAG TCGATTTCCC CAAAGACCAG
ACCTGCTGCG GCCAGCCCAT GGCCAACACC GGCTGTACCG TCGACGCCAT CCCGGTCGCC
AAAAAATTCA TCGAGCTCTT CGCCAGTTAC GACCACATTG TCTGTCCTTC GGGAAGCTGT
GTGGCCATGA TTCGCAGTCA TTACGAACAT CTGCTTCACG ATGAAATTGA AGCGGGCCGG
GTCGATCGAG CCAAGTTCAA ACACGTCGAA AAGAACACAC TCGAACTCGT CGAGTTTCTG
GTCGATGTCC TCAAGGTCGA GTCGCTGGAT GTTCCCTTTC CGCACAAGGT CGGCCTGCAT
CAAAGCTGTC ATGGCCTCCG CGAATTAAGG CTGGGCCAGT GCAGTGAACT GGTCTCACCC
GCTTACAGCA AAGCCGAACA ACTCCTCAAA ACCATGCCCG GGCTGCAACT GGTGGGACTG
AAGCGGGTGG ATGAATGCTG CGGCTTTGGC GGGACATTTG CCATTAACGA AGAGGCCGTC
TCGTGCATGA TGGGGAATGA CCGGATTCAC GATCACGAAG AGGCTGGAAC CGAAGTGATG
ACCGCTGGCG ATATGTCGTG CCTGATGCAT TTACAGGGAC TGCTGGTCCG TCAGAAAAAA
CCGATCAAGA TCATGCATCT CGCTCAGATT TTTGCCGGTC GAGCCGTGAC CTAA
 
Protein sequence
MHRVGLFIPC YIDQIYPDVG LATCDVLERF GCEVDFPKDQ TCCGQPMANT GCTVDAIPVA 
KKFIELFASY DHIVCPSGSC VAMIRSHYEH LLHDEIEAGR VDRAKFKHVE KNTLELVEFL
VDVLKVESLD VPFPHKVGLH QSCHGLRELR LGQCSELVSP AYSKAEQLLK TMPGLQLVGL
KRVDECCGFG GTFAINEEAV SCMMGNDRIH DHEEAGTEVM TAGDMSCLMH LQGLLVRQKK
PIKIMHLAQI FAGRAVT