Gene Plim_3595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3595 
Symbol 
ID9140313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4628243 
End bp4629820 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content44% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631607 
Protein GI296123829 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA AAGTGGGCGA TCAACGAATC GAAATCATAA ATGATGACCG TGTGTACACT 
TCTTCAGAGT TGATTGGTAA GCTCAACGCT GAAGGTTTTA GCACTCCAAA TGCTCGCAAA
ATCCTCAGTC GCGAGTCACA AAAAAAGAGC CTTTGGCGTT CAGAAACGCT CAAATTACCG
AGAGATGAAC GACTATTTTC TCGATTGGGA TTGGTTGGAA CGCCATCCTT CTTCGCACAA
ATCGGAGAAA AACTAAGGTC AACACAACGG CATGGAATAG CGAGAAGTGT CGCAGCTCTT
GGTACGCATA AGCTGCTTCA TCGCATGGAT CTGCTACGTC TCCTCGCTGT GACATCATCA
ACGGATGCCG CCCTGTCAGG AAGTCGGCAA AGACTCTCAT TTGAGGAGGA GTGCCGCTCG
CTCGAAGAAC TTGGAGCAAA AATCATTCAG CGTGGAACAG CTTTAGAGTC AGTTGTGGCA
CCACAGGCTG TGCAAACCGG TGAAGACCTA GATTCTCTTG CAGTGATTGC CTTAAGCCGA
ATTCGAGTTG AAACACTTCT CGCAAAGATT TTAACTGAAC GGTTTCGAAA GCAGAATCTC
ATATCATGGA ACTGCATCGA TATCGCGGAC TTTGACAAGC CATACGTTGT TTTCAATGGG
CAAGTTTTCA CAGCATATGG GTTTTCCTAT CTTGGACCTC TAAGGCGGTG GAAAGATGGA
AACCGAACTC CTACTTCATG TCCAGTCGTT ATAGACTGTT ACCACGATAT GTGCTCCCTA
CCTCAGGTTG AATCTTTGCT TCAAAGAATT CAACGAGCAG CCTATCGAGG CCGCAAACAG
CAGCCCATCT TGGGCGTAAT TGCCGCACGC GACTTCGAAA CGGAGGCGTG GAGTAAAGCT
CGTCAAGAAT CGTTAATGAC TGTTAGCTTT CGCCAATTGT TCGGCGATGA AGCATTGAAT
GTAATGATTC AGATTGAACA ACTGCTTTGC GGAATATGCC AGTCCGATCC AAAAAACTCT
CAAGATCAAT ATAATAAAGT GGCTACACTG ATAGAAGACT TAAAGGTGAA TCCAATTGTA
GCAGATTTAC GAGCAATTGG TCTTGAATTA ATATCTGCTT TGATTCTGCA ATCAAATGGA
TTCACTTCAC TAGAGCTCGG TCGAGTCGTT CCATGGGGTA GTACATCTCG CGATGTAGAT
GTTTTTGGGA TTCGTGCGGA TAATGAGTTG AGAATTGTGG AATGTAAAGC CTATCACCAT
AAAAAATCTC TTCTTGACTC CGATGTAAAA AAGTTTTTTA CGGAAACCGT ACCAGCATTG
AAGAAATGGC TGAAAGACAA TTCTCGTCAT TTTGAAAAAT GTATTGCTGA AATTTGGACG
ACAGGGCCTA AAGGCAAAAA CGCAGAAAAC ACCATGAAGG AAATTAGAGT GCCTGCTGGT
GACAATTGGA CAATACGAAG AATGAGTGAT ATGCACGCAG AGATACCAAA AAATATACGA
AGACGCAGTG TGGCGCTCTT AAAGGCCATT TCATTTCCAG AAACAGACCT GAACGACTTA
TGCAACGAAG AATGCTGA
 
Protein sequence
MQKKVGDQRI EIINDDRVYT SSELIGKLNA EGFSTPNARK ILSRESQKKS LWRSETLKLP 
RDERLFSRLG LVGTPSFFAQ IGEKLRSTQR HGIARSVAAL GTHKLLHRMD LLRLLAVTSS
TDAALSGSRQ RLSFEEECRS LEELGAKIIQ RGTALESVVA PQAVQTGEDL DSLAVIALSR
IRVETLLAKI LTERFRKQNL ISWNCIDIAD FDKPYVVFNG QVFTAYGFSY LGPLRRWKDG
NRTPTSCPVV IDCYHDMCSL PQVESLLQRI QRAAYRGRKQ QPILGVIAAR DFETEAWSKA
RQESLMTVSF RQLFGDEALN VMIQIEQLLC GICQSDPKNS QDQYNKVATL IEDLKVNPIV
ADLRAIGLEL ISALILQSNG FTSLELGRVV PWGSTSRDVD VFGIRADNEL RIVECKAYHH
KKSLLDSDVK KFFTETVPAL KKWLKDNSRH FEKCIAEIWT TGPKGKNAEN TMKEIRVPAG
DNWTIRRMSD MHAEIPKNIR RRSVALLKAI SFPETDLNDL CNEEC