| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3588 |
|---|
| Symbol | |
|---|
| ID | 9140306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 4621192 |
|---|
| End bp | 4622052 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | Endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_003631600 |
|---|
| Protein GI | 296123822 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAACTCG CGATCCTTCT GCCGTGGTTT CTGCTGGTGG CGCTTTTGCT CTCTTGGGGA
AGTGACCGGG TTCCTGCCGA TCTCCATCAG CCAGTCGCGA TTTTCCCGCC ACCTGCCGAT
GGAGACTTAT CTCCAACAGC GGTCGATTTG CCACAAGCGG ACTCCACCAA TCAGCCAGTT
CTCTTTGAGG TGGCTACGTT CAATTTGCAT CGCGGCAAAG GGGGTGATCA ACCAGCGAAA
ATCGATGGCT TTCGCCAGCT GCTCGATGGC TGTGACATCA TTGCCCTGCA GGAAGATGTA
CTGATCAATG GAAAAACGTT CTCGCGCCAG TTGGGCGCAT CCATGGGACT GTGGGCCATG
GAATTTCCCA CAGAGTTTCA ATGGGGCCAA GTGAATGGCG GGAATGGTCT ATTGCTCAGC
CGCCCTCCTG GCCAGATCGC GACGATTCCA CTCCCTAATG CGAAAGGTAA AGCCTTCCGA
CAGATCGCAC TGATTCCCGT CTCAATGGGT GAAGTTCGCC TGACAGTTCT CGCCACGCAT
CTCGACAGCA CGACGGATCG ACCCGCACAA TGGCCCATTC TCATCGAGCT GTGGAAGTCA
CTGGCACCCC CTTGCATCCT GCTGGGGGAT TTGAACACAC GTCCCGAAGA TCCTTTGATG
AAACCGTTAC TTGCTGTGGA GGGAACAGAA GATCCGCTCG AGATTATCGC CCGAAGAAAT
GGCAGCACTC AGGCCGCTCA TATCGACTGG ATTTTGACCC GCGGCCTGAA AACGATCTCG
GCCGAAGTCA TTCCAACCAA GCTATCCGAT CACCCTGTCG TTCGTGCCAG GCTGGAATGG
CCTGAAGAGC CGAAGCGATA A
|
|---|
| Protein sequence | MKLAILLPWF LLVALLLSWG SDRVPADLHQ PVAIFPPPAD GDLSPTAVDL PQADSTNQPV
LFEVATFNLH RGKGGDQPAK IDGFRQLLDG CDIIALQEDV LINGKTFSRQ LGASMGLWAM
EFPTEFQWGQ VNGGNGLLLS RPPGQIATIP LPNAKGKAFR QIALIPVSMG EVRLTVLATH
LDSTTDRPAQ WPILIELWKS LAPPCILLGD LNTRPEDPLM KPLLAVEGTE DPLEIIARRN
GSTQAAHIDW ILTRGLKTIS AEVIPTKLSD HPVVRARLEW PEEPKR
|
|---|
| |