Gene Plim_3578 details

Gene Information

• Locus tag: Plim_3578
• ID: 9140296
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 4608144
• End bp: 4608938
• Gene Length: 795 bp
• Protein Length: 264 aa
• Translation table: 11
• GC content: 54%
• Product: hypothetical protein
• Protein accession: YP_003631590
• Protein GI: 296123812

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAGGC ATTCAAACCC TGAGACGAAT CGTTGGGAAG AAATCCAGGT GACACGACTG 
CTGTTTGGTC TGACCGAGGA AGAGAAGACG GAGTACGACA GTATTGCGAG TCGAATCCCT 
GTCGAAGAAC TCGAACAATT GGATCAGGTT GTCGCTTCTC TTGATGTGAT TTGGGCGGAC 
ATGCAAACGG AACCACTGCC TGAACATCTA CGCCACGCAA TCCGAATTCG AGCCTCGCAG 
GAATTGGCCG CAAAGCCTGT TGTGTCATTG GCCAAGCCCT CGACCTATGC TATGGCGACC 
CTTCGCGGAA ACAGATATCT GCCCTGGTTT GTTTCAGCTC TCTGCCTGAT GTTTGCGGTG 
TTTGCCTGGC TCGATAACCG ACCGATAGAG AAAGTACGCC CTGACGTCGC TCAACTGCAA 
GCTGAATTGC TCACTGCGAA CCAGGGGCTT GTGCAGGCAA AATGGTCACC AGGGCCGACG 
CCCAGCGAAG GTGCCACAGG CGACATCGTC TGGAGTGCTT CGCAGCAACA GGGTTTCATG 
CGCTTTCGAG GATTGCCGGT CAACACGCCC AGCCAGGAGC AGTATCAGTT GTGGATTTTC 
GCCAGAAATC AAAGTGACAC GACGCCGATT GATGGCGGGG TGTTCGACAT CACATCGACC 
GAAGAAGTTG TCATCCCGAT CAACGCGAAG CTGTATGTTC AAGACGCGTA TATGTTCGCA 
GTTACGATCG AAAAGCCAGG CGGCGTGGTG GTATCTTCTC GCGAACGACT GCCACTCCTG 
GCCAAAGTCG AATAA 

 

Protein sequence

MSRHSNPETN RWEEIQVTRL LFGLTEEEKT EYDSIASRIP VEELEQLDQV VASLDVIWAD 
MQTEPLPEHL RHAIRIRASQ ELAAKPVVSL AKPSTYAMAT LRGNRYLPWF VSALCLMFAV 
FAWLDNRPIE KVRPDVAQLQ AELLTANQGL VQAKWSPGPT PSEGATGDIV WSASQQQGFM 
RFRGLPVNTP SQEQYQLWIF ARNQSDTTPI DGGVFDITST EEVVIPINAK LYVQDAYMFA 
VTIEKPGGVV VSSRERLPLL AKVE