Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3572 |
Symbol | |
ID | 9140290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 4600313 |
End bp | 4601986 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | RNA binding S1 domain protein |
Protein accession | YP_003631584 |
Protein GI | 296123806 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGTG ACGGTGAAAA CAAACCTGTG GATGCCAGCC TTTCGCCTGA GGCATCTTCT CCAGCAGAAC CTGTCTCTCC GGCAGAACCT GTCTCTTCTG TAGAGGCAGT TGCTCCCACA GAGCTTTCGA GTGCTCCCCA GGTTGTTCCC GGCGACACCC CGGTCGCTTC TACTCCAGCG GCAGAAGCTG TTTCACCAGA AACTGCGCCA GTGGTCACGG CTGCTGCGGA AGCTGCACCA ATCGCAGCAG AGGCACCTCG CAAGCGAGTG GAACTCAATC CGACACTCTC GTCCAAAGAT GGACTGGCCA TTCCCACTTA CGCTGCTGAT GGACAGACGC CGGGCGTGCC CCAGGTGGCG ACGATCCCTC AAGCGGGCCC GGTGGAAATT CCCCGGACCG AAGAACTTGA CCCCGCACTG GAAGCAGAAC TGGCTGCCGC GATGTCGGGT GGAGCACCGA CAGTGGCTGG TGCCAGTGAG ATTGTGGGTG CGGGCGATAA CGCTTCCGTC GCTGCACAGA TTACTTCCGA AGACCAACTG GCACCGGGCA TGAAGCTCAA GGCCAAGGTG CAGTCGGTCT CACCCGAAAA CACGTTTGTC GATCTCGGCT TCCGCTCGCC CGGCATGCTC CCCACGCGAA ACTTTCCCCA GGGAAAGCCG CCACATCCTG GTGAAGAGCA TCTGGTCATC GTGGAAAAGT ACGATGCCGA GCAGGGGCTG ATCTACGTCA ATCTGACCAA GTCGACCCGT CGGGCCCGTG GCAACTGGGA TGAACTCCAG AAGGGTCAGA TCGTTGAAGC TTATGTGACC GCTGTGAATA AAGGCGGGCT GGAAGTGGCT GTGGGCCAGA TTCGTGCCTT CCTGCCAGCG AGCCAGGTGG AACTTGGTTT TGTCTCCTCA ATGGATGCTT TTGTGGGGAA GAAGTTCCCG GTGGAAGTCA CAGAAGTGAA TCCCGCCAAG CGGAATCTCG TGGTCAGCCG CAAGGCGATT CTGATTGCGG AGCGTAAAGA AGCTGCTGCC AGTTTCTGGG ATAAGGTCGA AGTCGGCCAG AAGTTCACAG GGACGATCAA GACGATCAAG GATTACGGGG CGTTTGTTGA TCTCGGTGGG GTCGATGGCT TCCTGCATGT GGGCGAGATG AGCTGGACTC GTATCAAGCA CCCCACAGAT TGTGTGCGTG AACAGCAGAC GGTCGACGTG GTGGTGCTGT CGCTCGATCG CGAAAAGCAA AAGATCGGTC TGGGCATGAG GCAACTCGTG CAGAACCCGT GGAACTCGGC CCCTGAGACA TATGCCGTCG GCAAGACTGT CACAGGTAAG GTGACACGCA TTACCGATTT TGGTGCGTTC ATTGAGCTTG AGCCGGGTGT GGAAGGAATG ATCCATATCA GCGAGCTGGA CTACAAGCGG GTCAAGCGTG TGGCTGATGT GCTTAAGGAA GGTCAGCAGG TCGATGCTCA AGTGCTGGAA ATTCAGCCTG AGCGTCAGCG GATCAGCCTG TCGGTCAAAG CCCTCAAGCC GAAGCCTGAA GTGGTGGCTC CACCCAAGGA TGAAGACCTT GCCCCCGGTA AAGGCCAGCA GTACGAGCGC AAACGCAAAG AGCCGCTGCG TGGTGGTACG ACAGGGAATA CTGGATCAGG TGGTCTGTTT GGTGACCCCA ACTCCTTCCG CTAA
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Protein sequence | MSGDGENKPV DASLSPEASS PAEPVSPAEP VSSVEAVAPT ELSSAPQVVP GDTPVASTPA AEAVSPETAP VVTAAAEAAP IAAEAPRKRV ELNPTLSSKD GLAIPTYAAD GQTPGVPQVA TIPQAGPVEI PRTEELDPAL EAELAAAMSG GAPTVAGASE IVGAGDNASV AAQITSEDQL APGMKLKAKV QSVSPENTFV DLGFRSPGML PTRNFPQGKP PHPGEEHLVI VEKYDAEQGL IYVNLTKSTR RARGNWDELQ KGQIVEAYVT AVNKGGLEVA VGQIRAFLPA SQVELGFVSS MDAFVGKKFP VEVTEVNPAK RNLVVSRKAI LIAERKEAAA SFWDKVEVGQ KFTGTIKTIK DYGAFVDLGG VDGFLHVGEM SWTRIKHPTD CVREQQTVDV VVLSLDREKQ KIGLGMRQLV QNPWNSAPET YAVGKTVTGK VTRITDFGAF IELEPGVEGM IHISELDYKR VKRVADVLKE GQQVDAQVLE IQPERQRISL SVKALKPKPE VVAPPKDEDL APGKGQQYER KRKEPLRGGT TGNTGSGGLF GDPNSFR
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