Gene Plim_3554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3554 
Symbol 
ID9140272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4584389 
End bp4584778 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631566 
Protein GI296123788 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.034542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAAC CCCTGGCACT CCGTATTGTG CTCCAACCTC CACCCGCTCC GGGAATCTTT 
CCCGACTTTC AGCGCGATCA GCTCACTCCT TTCCGCCAGC GACTCGTTCG TCAGACAGCC
AGAAAACTGC TGCAGCGCAT TGCCCAGTTG ACTCCTGTCG ATACAGGCCG GGCTCAATCG
AGCTGGCTGC TCGCTGCCCA ACAACTCCAG CCCGAAACAG CCGCCAATAC CGCAACTCCC
GATCTGCAGA TCACGGAAGG AAAAATTGGT TCGCTTTCCA TCATCACCAT TGTCAATCAG
GTGCCCTACA TGCCCTTTCT CGAATTGGGA ACCAGCCAGA TGTCTCCCTT CGCCATGATC
CGGCGGGCAC TACTCGAACA GATCCGCTGA
 
Protein sequence
MNQPLALRIV LQPPPAPGIF PDFQRDQLTP FRQRLVRQTA RKLLQRIAQL TPVDTGRAQS 
SWLLAAQQLQ PETAANTATP DLQITEGKIG SLSIITIVNQ VPYMPFLELG TSQMSPFAMI
RRALLEQIR