| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3539 |
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| Symbol | |
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| ID | 9140257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 4568504 |
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| End bp | 4571122 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | SNF2-related protein |
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| Protein accession | YP_003631551 |
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| Protein GI | 296123773 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGCG GTCAACGACT GGCAGAAACG AATCCGGAAT TTATCCACAG GCTGGCCAGT
CTGACTCTGG AAGAGGCCCG GCAGATGCTG GGCCCTCAAG GCGATGCCCT GCTGAAGGAG
GTTGAAACAG AACCTTTCGA CGGTGAGCAG GCTTATCTCG CGGATGGTTT GTTCCGCGTG
ATGATTCCTC AACGAAAAAA TGATGGCAAA GCTTCCCGCC GCAAGGTGGT CGTGGCTGTC
CGGCCTGATC GCAGACAACC TTCTGGCCTG GCACTTTCCT GCACAGCGTG CAGCGATGGT
TGTACCCATC AGGCATTAGC CCTGCACTAC CTTCTCGCTT ACAAAGTCGA ACTGGGGCTC
ATGCCCCCGA CTGAAGAAGC GTTGCTGCAA CTGGCACCGG AACCAAGTCC CGAAGAGTTG
CAGAATCAGG CGATTTCGGA TCGTCGTGAG CGCGCCCGAC TGGAATCGAT GGAGATTCGC
CCCCTCGCCC CGGATGTTGT CTGGAGTGAT TATCTGGTGA CCAGCCGCAA AAGCGGGCGG
AGCTATCGTG TCGCCCTTCG CGGGATGGAA CCGGGAGAAT CGTATTGCAG TTGCCCCGAC
TTTCGCGCCA ATACGTTAGG CCTGTGTAAG CATCTGCTTC GAGTCCAGGA ACATGTGAAG
CGAACTTACT CAGCCGAAGC CCGGTCGAAG AAGTTTGTTC CGGAAGAGAT TGCTGTCCAT
TTGACGTATG GCGAGCTGGT CGAAGTTCGC TTGCTGATCC CTGAAAACTT ACCAGTCGAG
ATTGCCCCGT TACTGGAGTT GTACCGTGAT CGTGCGGTGA CCGATTTGAG CCATCTGGTG
CATACTCTCG CGAAGGTTCG CATGGCTCAG GTGCCCGTGG TGATTTACCC GGATGCCGAA
GAATTTCTGC AGCAGGAGTT TGATCGCCGC CGGATGAAAG CGATGACGGA ATCGCTAGGT
CATGACGCGG AAAATCACCC CTGGCGGACG GAATTACTCA CCACACCTTT ACTGGGATAT
CAGTTGGAAG GGGCCGCGTT TCTCGCCTGT GCAGGCCGCG CCATCCTCGC CGACGAAATG
GGGCTGGGGA AAACCATTCA GGCACTGGCG GCAATCGAGA TTCTCTTTCG AGAACTCGAT
ATCTCGAAGG TGCTCGTCGT TTGCCCGGCT TCTGTCAAAT CGCAGTGGCG AAATGAAATT
TTGAAGTTCA CCACGCATTC CGTGCAACTG GTGGGTGGCT CGATAGAAAC CCGCCACGAG
CAATATGGGG CAGCTCCGTT CACGATCTGC AATTACGAGC AGGTGCTGAA AGATCATGTC
AGCATTGCTG CCAAACGCTG GGATGTCGTG ATTCTCGATG AAGGACAGCG CATTCGTAAT
TGGGAAACCC GCACTGCCCA GGCCATCAAA AGTTTGCGAT CTCGCTTTGC CTTCGTACTG
ACGGGAACAC CGCTGGAGAA CAAACTCGAC GACCTCTATT CGATCATGCA GTTCATTGAT
GATCGCCGAC TCTCACCCGC CTTTCGATTT TTCCCCAGGC ACCGCATGAT CGATCAGAAG
GGGCGATTTG TCGGCTATCG CAATCTTGAC GAACTGCGCG AGAGGCTGGC ACCGGTCTTT
CTGCGTAGAA CAAGATCTCA GGTTCAACAG CAGTTGCCTC CCTGTACTGT GCATCAGGTG
CTGATCGCCC CGACATCGGC TCAAAGGCAG GTGCATGCCC GGCATTTTGC CCAGGTTTCG
AGAATTGCCC GCAAGCCGCA CCTCCATGAA CTTGACCTGA TGCTCTTACG GAAAGAGCTG
TTGTATTGCC GACTGGCGGC GAACAGCCCG GAACTCGTCG ATGATCAAAT CGTGGGAGAA
TCATCGAAAC TTGACCGACT GAGCGAGATG TTCGATGAGA TGTTTGAAGG GCACTTTGAG
AAAGCGATTG TCTTTTCCGA ATGGACACGC ATGCTCGATC TCATTGAACC ATTACTCGAC
AGCCGCAATC TGCCGTATGT CAGGATCGAT GGACAGGTCT CGCAGCGTGA ACGGGCAGCA
TCTGTCTCGC AGTTTGAGGA CGATCCCGGA ACCCGCGTGC TGCTGGCCAG CAATGCGGCT
GCGACGGGTC TCAATCTGCA GGCCGCCAGC ATTGTGATCA ATGTCGATCT CCCCTGGAAC
CCGGCAATTC TGGAGCAGCG CATCGCGCGG GCGCATCGCA TGGGACAGGA AAAACCGGTT
CAGGTCTATG TGCTCGTGAC GGAAGAGACG TTTGAAGAGC GGCTGCTCAA GACACTGGAA
GGGAAAGAAC AACTCGCTCG TGCTGTGCTT GATGAAGGTG CCGAGATCAA GGAGGTCTGG
CTGACCAGTG GCAGCGACAG TTTGAGGGCT GAATTGCAAG GCCTTCTGGA GCCTGATCCC
GCGACGACCG GTGAACGACA GCCAACGTTT CCCTCTGCGG GAATGCTCGT TGATCAGGCA
ACATCAGCCC AGGTGCACGC CATTCGCGAC CGGTTGAAGC ATTATCTGGA ACGCGATCCC
CAGGGCCGCT GGCAATTACG CATTCCTCTC GCCAGTGAAA ACGCCCTGGA TGAACTCGCG
AAAACATTCC AGCAATGGGT GGGCGAGGCG ATTGATTAA
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| Protein sequence | MTRGQRLAET NPEFIHRLAS LTLEEARQML GPQGDALLKE VETEPFDGEQ AYLADGLFRV
MIPQRKNDGK ASRRKVVVAV RPDRRQPSGL ALSCTACSDG CTHQALALHY LLAYKVELGL
MPPTEEALLQ LAPEPSPEEL QNQAISDRRE RARLESMEIR PLAPDVVWSD YLVTSRKSGR
SYRVALRGME PGESYCSCPD FRANTLGLCK HLLRVQEHVK RTYSAEARSK KFVPEEIAVH
LTYGELVEVR LLIPENLPVE IAPLLELYRD RAVTDLSHLV HTLAKVRMAQ VPVVIYPDAE
EFLQQEFDRR RMKAMTESLG HDAENHPWRT ELLTTPLLGY QLEGAAFLAC AGRAILADEM
GLGKTIQALA AIEILFRELD ISKVLVVCPA SVKSQWRNEI LKFTTHSVQL VGGSIETRHE
QYGAAPFTIC NYEQVLKDHV SIAAKRWDVV ILDEGQRIRN WETRTAQAIK SLRSRFAFVL
TGTPLENKLD DLYSIMQFID DRRLSPAFRF FPRHRMIDQK GRFVGYRNLD ELRERLAPVF
LRRTRSQVQQ QLPPCTVHQV LIAPTSAQRQ VHARHFAQVS RIARKPHLHE LDLMLLRKEL
LYCRLAANSP ELVDDQIVGE SSKLDRLSEM FDEMFEGHFE KAIVFSEWTR MLDLIEPLLD
SRNLPYVRID GQVSQRERAA SVSQFEDDPG TRVLLASNAA ATGLNLQAAS IVINVDLPWN
PAILEQRIAR AHRMGQEKPV QVYVLVTEET FEERLLKTLE GKEQLARAVL DEGAEIKEVW
LTSGSDSLRA ELQGLLEPDP ATTGERQPTF PSAGMLVDQA TSAQVHAIRD RLKHYLERDP
QGRWQLRIPL ASENALDELA KTFQQWVGEA ID
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