Gene Plim_3524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3524 
Symbol 
ID9140242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4550928 
End bp4551860 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content48% 
IMG OID 
ProductAbi family protein 
Protein accessionYP_003631536 
Protein GI296123758 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTACG AGAAAAAATT TCTCACCTTC TCAGAGCAAG CCGATCTTCT GATTCAACGG 
GGTTTGAAAG CAGATCGTGA AATTCTCATT CAGCATCTTC AGTCAGTAAG TTATTACCGA
ATAAGTGCTT ACGTTCGACC ATTTCGTCAG AAAAGCTCCC CGAACGACCC CATCCGTGAA
GACCTGGTAC CCGGAACCAC TTTCGATGAC ATCTGGTCGA GATATGTTTT CGACCGCAGG
TTACGACTCC TAGTTATGGA TGCGATCGAA CGCATTGAAG TCGATATTCG GACAAACCTG
ACATACCTGC ATGCTGAAAA GCACGGCCCA TTTGGCTACG CAGATGACAC TGGTACGCTG
CCTAATGTGC AAAGTGAGGA AGATCGCGAA AGGCTGCTCG AAGCACTGAA AGAGCCGTTG
GCCAAAAGCA AGCCTCACGA AGATTTTGTC AAACACTTTA AGACAAAGTA CGGCTCACAT
CATCGATCAC TTCCCATTTG GGCCGCATGC GAAGTTATGA CTTTTGGCCA CCTGCTGACT
TTCTACAGAG CTAGCCACCG GGACATCCAA AAGATCGTCG CCAGGCGATA CAAGCTTTCT
GATATCGTTT TTGAGTCATG GCTTGTGACG CTGAATATGG TTCGCAATGT CTGTGCACAC
CACGGTCGTC TTTGGAATCG TGAATTGGGC GTCAAACCCA TGGTTCCCAA TAAGGATCAT
CAATGGAGAC ATGGAGTTGG TGCCAGTGCG CAACCACTAC CGGACAATCG TGTGTTTATA
GTACTCACCA TGCTTAAGTT CTGCTTGAAT CTGATCTCAC CCGACAGTCA ATGGGGGCAG
GGTCTCAAGG GGTTGCTGAA CGAGTTCCCC AAGATTCCAT TACGTTCCAT GGGCTTCATC
GACCAATGGG AATCTCACGT CCTTTGGAAA TAG
 
Protein sequence
MEYEKKFLTF SEQADLLIQR GLKADREILI QHLQSVSYYR ISAYVRPFRQ KSSPNDPIRE 
DLVPGTTFDD IWSRYVFDRR LRLLVMDAIE RIEVDIRTNL TYLHAEKHGP FGYADDTGTL
PNVQSEEDRE RLLEALKEPL AKSKPHEDFV KHFKTKYGSH HRSLPIWAAC EVMTFGHLLT
FYRASHRDIQ KIVARRYKLS DIVFESWLVT LNMVRNVCAH HGRLWNRELG VKPMVPNKDH
QWRHGVGASA QPLPDNRVFI VLTMLKFCLN LISPDSQWGQ GLKGLLNEFP KIPLRSMGFI
DQWESHVLWK