Gene Plim_3499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3499 
Symbol 
ID9140217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp4523591 
End bp4524223 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content57% 
IMG OID 
ProductRNA polymerase sigma-70 factor 
Protein accessionYP_003631511 
Protein GI296123733 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGAAA ATACGATCCA GACTGACGCA CTGCTGAAGA ACCTCCGGGA AGGGAATGAC 
AAAGCTGTCA ATGAACTTCT GGAGAGACAC CGTACACCCT TGCGCCGGAT GATTGAATTG 
CGGCTGGATC GGCAGATGGC TCGCCGGGTC GATGCCAGTG ACGTGGTCCA GGATGTCTTT 
ATGGAAGCCT CCGGGCGACT GCGGGAATAT CTGGAAAATC CCCGTCTGCC ATTTCATGTC 
TGGCTGAGAC ATCTGGCGCG GGACCGCATG ATCGATCTGC ATCGCCGGCA TCGCGGTGCA 
CTCCGGCGGA GCATGGATCG CGAGCAGGCC TTGCCCGTCA GCCAGGAGAA TTCCGGCGAT 
CAACTGATGG ATCAGTTCAA AGATGATGAA CTGACACCGG CGGCTGAGAA CATTCGCCGC 
GAGTTCGAGG AACGATTTCT GCTGGCACTC GAACAGCTTG AAGCGGATGA CCGCGAGATG 
ATCCTGATGC GTCACTTTGA ACAATTGGGG AATAACGAAG TGGCCGAGAT TCTGGGGCTC 
ACGCCACCAG CCGCCGGCAT GCGCCATTTG AGAGCCCTGC GCAAATTGAG AAATGTTCTG 
GGAGAAGATG GACTCAGCCT CCCAGGGACC TGA
 
Protein sequence
MQENTIQTDA LLKNLREGND KAVNELLERH RTPLRRMIEL RLDRQMARRV DASDVVQDVF 
MEASGRLREY LENPRLPFHV WLRHLARDRM IDLHRRHRGA LRRSMDREQA LPVSQENSGD 
QLMDQFKDDE LTPAAENIRR EFEERFLLAL EQLEADDREM ILMRHFEQLG NNEVAEILGL 
TPPAAGMRHL RALRKLRNVL GEDGLSLPGT