Gene Plim_3485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3485 
Symbol 
ID9140203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4507236 
End bp4507739 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content57% 
IMG OID 
Productregulatory protein MarR 
Protein accessionYP_003631497 
Protein GI296123719 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAACATC TCCCGATCAC TCCCATGCTC TCGGCAGATC AAGTGCTGGA GCTGCTCTTT 
CGCACATCGC ATGTGTTGAA AATGGAGCTG GATTCTCAAC TCGGCGAATG GAACATGACT
GAGGCCCGCC ATGGGCTGAT GAAGCTGCTG GTGGATCGCC ATCCCGATGG GCTCCTGCAA
ACAGAACTGG CCCGGCTGCT CATGCAGTCG GAATCGAACA TCTCGATGCT GGTCGATCGA
TTGCAGGCCG ACGGCATTCT CGAACGCATT ACACCCAAGG GTGATCGCCG CAAACGATTA
CTCTGTCTGA CACCGGCTGG GCTCGAACTG TGGAACGTGG TCGAGCATGT CCGTCAGCGG
TGGGCCGAAT CGTGCTTCCG CAGTCTGGGG GAAGATCGAA AAATCCAACT GGGCGTCTGG
CTGAAGTCGA TTCTGAGAGA AGTGCGTCCT GAAGAAGTTC CTGCACTTCC AGCAGCCAGA
TTCTGGCGAC GGGAGGCTTC CTGA
 
Protein sequence
MEHLPITPML SADQVLELLF RTSHVLKMEL DSQLGEWNMT EARHGLMKLL VDRHPDGLLQ 
TELARLLMQS ESNISMLVDR LQADGILERI TPKGDRRKRL LCLTPAGLEL WNVVEHVRQR
WAESCFRSLG EDRKIQLGVW LKSILREVRP EEVPALPAAR FWRREAS