Gene Plim_3462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3462 
Symbol 
ID9140180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4479136 
End bp4480443 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631474 
Protein GI296123696 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGATG TGAGTCCGTT TTGTGGATGG CGTTATCAAC TGGGTCAAGT CGGTGATCTG 
GCCGATGTGA CAGCGCCCCC CTATGACGTG ATTGGGCCGG AGGAACTCAT CCAGTTCCGG
CAGAAACATC CGGCGAATAT CGTCCATTTG ATCCTGCCGG AATCGCTGCC TGATGATCCT
GGTCCCGATG AACGTTATCA ACGGGCAGCT GCACTTCTGG CACAGTTCAA GCTCGATGGC
ATCCTGGCGC GTGATCATGC AGATGCCTAT TACGTGTATC ACCAGACCTT CGAGATCGCT
GGTGAAAGAT ATGTGCGAAA AGGGTTTCTC GGGCGGCTCA AGCTCTCGCC ATTTGGTGAA
GGTCAGGTCT TTCCGCATGA GCGCACGCTG GCCGCACCGA AGGCGGATCG GTTGAAGCTC
TTTCGTGCCG TAAAGACCAA TCTTTCGCCC ATTTTCGGTT TGTATGAAGA CCCGGCCGGT
GAGGTCGAGC AGGTGCTGAC CACAGCCCTG GCAGGTCAAA CGGGGGTACA GCTGATCGAC
GAACAGCGAG TCCTGCACCA GCTCTGGCCA ATTTCCGACC CGCAGGTGAT GTCGAAAGTG
ACCTCGCTGA TGAAGAGTCG GCCGGTGGTG ATTGCGGATG GACATCATCG CTATGAAACC
GCCCTCGCCT ATCGCGAGGA ACTGGTGGCA ACAGGCACGA TCACAAATGA ACTGCATGCC
GCGAACTCGG TAATGTGCAT GTTCGTCGCT TCGGAAGATG ACGGGCTCAT CGTGTTGCCG
ACACATCGCA TCGTCAAAAA CTGGCAGGGG TTGACGGCTC AGCAGATCGG CATGGCATTA
ACGCCAGTGT TTGAAGTGGA TGTGGTCGGG AGTCATGCGA CAGCAGCCCA GGATGCGTGG
GATCTGGCAC AATCCTGTGG GAATGGCTGT GCCCTCGCTC TGGGAACTTC TGCGGATTCG
ACGTGGGTGG TGGCCGAGTT GAAAGACGTG GCCTCGATGC GGCTGGCTTC TCCCGGCAAA
TCGGCTGAGT GGTGCCAGTT ACCAGTCAGT GTGCTGCATC AACTGGTGCT GCCACGATTG
GCACCACTGG TGCATCCACG GGAAGAAGCC AATCTGGAAT ACGTCCACGA AGATCAGACA
GCCGCCCGCG CCATCGAAGA AAAGAGTGCC GGTCTGGCAG TGCTGGTTCC TGCGACGAGT
GTCACCCAGG TGGAAATGAT TGCCCAGGGC GGAGAGGTGC TACCTCCCAA ATCGACCTAC
TTCTACCCCA AGTTGCGCTC GGGAATGGTG CTGAATCCTT TGACGTAG
 
Protein sequence
MVDVSPFCGW RYQLGQVGDL ADVTAPPYDV IGPEELIQFR QKHPANIVHL ILPESLPDDP 
GPDERYQRAA ALLAQFKLDG ILARDHADAY YVYHQTFEIA GERYVRKGFL GRLKLSPFGE
GQVFPHERTL AAPKADRLKL FRAVKTNLSP IFGLYEDPAG EVEQVLTTAL AGQTGVQLID
EQRVLHQLWP ISDPQVMSKV TSLMKSRPVV IADGHHRYET ALAYREELVA TGTITNELHA
ANSVMCMFVA SEDDGLIVLP THRIVKNWQG LTAQQIGMAL TPVFEVDVVG SHATAAQDAW
DLAQSCGNGC ALALGTSADS TWVVAELKDV ASMRLASPGK SAEWCQLPVS VLHQLVLPRL
APLVHPREEA NLEYVHEDQT AARAIEEKSA GLAVLVPATS VTQVEMIAQG GEVLPPKSTY
FYPKLRSGMV LNPLT