Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3455 |
Symbol | |
ID | 9140173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 4467673 |
End bp | 4468617 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | hydroxymethylbutenyl pyrophosphate reductase |
Protein accession | YP_003631467 |
Protein GI | 296123689 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGGATAC TTCTGGCAAA TCCTCGTGGC TTTTGTGCTG GTGTGAACAT GGCCATTGAG TGCCTGGACG AAGTGATCCG CATGTTCGGG CCGCATGTCT TCGTGTACCA CGAGATTGTT CATAACAAGT ATGTCGTCGA TCGATTCACA CGTCAGGGTG TGACTTTTGT GGACTCGGTC GAAGAAGTCC CCGAAGGTTC AGTGCTGTTA TACAGTGCCC ATGGTGTTTC GCCTGTCATT CGGCAGGCAG CCCGTGAGCG AAAACTGCAG ACGATTGATG CCACCTGCCC GCTGGTGACC AAGGTGCATC TGGAAGCCAT CAAGTACGCC CGGGAAAAGT ACAATATTAT TCTCATCGGC CATGAAGGTC ATGACGAAGT GATCGGCACG ATGGGTGAAG CTCCTGAGAG TATTACCCTG GTCGAGACCG ACGAAGATGT GGCCAGTTTA CCCTTCACAG CAGAGGATCC GCTGGTTTAC CTGACTCAGA CAACACTTTC GGTCGAGGAA GCCGGGAGAG TGGTAGCCGC CCTGAAGGCG CGATATCCGC ACATCAAATC TCCGCCAAAA GAAGATATCT GCTACGCGAC GACCAACCGA CAGGAAGCTG TGGCTCAACT GGCGGCCGAG GCCGATCTGG TGATTGTGCT GGGAAGCCAG AACAGTTCGA ACAGCCGCCG GTTGATGGAA CTTGGCAGTG GAGGCAACAA ACCTTCGTAT CTGGTGGATG GCGCTCACGA ACTCAATCAC GCCTGGTTTG AGAATGTCGA ATGCGTGCTA ATCACGGCTG GTGCCAGTGC TCCCGAGGTT GTTGTTCAGG ATTGTATCGA ATACCTGCGA ACCAACTTCG GTGCGAAGGT GGATGAACGC ACCATCCGCG AAGAGCACGT CTCCTTTCCG CTGCCTAAGG AACTTCGAGC CTTGCAGAAG TTGCGCATAG AGTAA
|
Protein sequence | MRILLANPRG FCAGVNMAIE CLDEVIRMFG PHVFVYHEIV HNKYVVDRFT RQGVTFVDSV EEVPEGSVLL YSAHGVSPVI RQAARERKLQ TIDATCPLVT KVHLEAIKYA REKYNIILIG HEGHDEVIGT MGEAPESITL VETDEDVASL PFTAEDPLVY LTQTTLSVEE AGRVVAALKA RYPHIKSPPK EDICYATTNR QEAVAQLAAE ADLVIVLGSQ NSSNSRRLME LGSGGNKPSY LVDGAHELNH AWFENVECVL ITAGASAPEV VVQDCIEYLR TNFGAKVDER TIREEHVSFP LPKELRALQK LRIE
|
| |