Gene Plim_3455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3455 
Symbol 
ID9140173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4467673 
End bp4468617 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content54% 
IMG OID 
Producthydroxymethylbutenyl pyrophosphate reductase 
Protein accessionYP_003631467 
Protein GI296123689 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGATAC TTCTGGCAAA TCCTCGTGGC TTTTGTGCTG GTGTGAACAT GGCCATTGAG 
TGCCTGGACG AAGTGATCCG CATGTTCGGG CCGCATGTCT TCGTGTACCA CGAGATTGTT
CATAACAAGT ATGTCGTCGA TCGATTCACA CGTCAGGGTG TGACTTTTGT GGACTCGGTC
GAAGAAGTCC CCGAAGGTTC AGTGCTGTTA TACAGTGCCC ATGGTGTTTC GCCTGTCATT
CGGCAGGCAG CCCGTGAGCG AAAACTGCAG ACGATTGATG CCACCTGCCC GCTGGTGACC
AAGGTGCATC TGGAAGCCAT CAAGTACGCC CGGGAAAAGT ACAATATTAT TCTCATCGGC
CATGAAGGTC ATGACGAAGT GATCGGCACG ATGGGTGAAG CTCCTGAGAG TATTACCCTG
GTCGAGACCG ACGAAGATGT GGCCAGTTTA CCCTTCACAG CAGAGGATCC GCTGGTTTAC
CTGACTCAGA CAACACTTTC GGTCGAGGAA GCCGGGAGAG TGGTAGCCGC CCTGAAGGCG
CGATATCCGC ACATCAAATC TCCGCCAAAA GAAGATATCT GCTACGCGAC GACCAACCGA
CAGGAAGCTG TGGCTCAACT GGCGGCCGAG GCCGATCTGG TGATTGTGCT GGGAAGCCAG
AACAGTTCGA ACAGCCGCCG GTTGATGGAA CTTGGCAGTG GAGGCAACAA ACCTTCGTAT
CTGGTGGATG GCGCTCACGA ACTCAATCAC GCCTGGTTTG AGAATGTCGA ATGCGTGCTA
ATCACGGCTG GTGCCAGTGC TCCCGAGGTT GTTGTTCAGG ATTGTATCGA ATACCTGCGA
ACCAACTTCG GTGCGAAGGT GGATGAACGC ACCATCCGCG AAGAGCACGT CTCCTTTCCG
CTGCCTAAGG AACTTCGAGC CTTGCAGAAG TTGCGCATAG AGTAA
 
Protein sequence
MRILLANPRG FCAGVNMAIE CLDEVIRMFG PHVFVYHEIV HNKYVVDRFT RQGVTFVDSV 
EEVPEGSVLL YSAHGVSPVI RQAARERKLQ TIDATCPLVT KVHLEAIKYA REKYNIILIG
HEGHDEVIGT MGEAPESITL VETDEDVASL PFTAEDPLVY LTQTTLSVEE AGRVVAALKA
RYPHIKSPPK EDICYATTNR QEAVAQLAAE ADLVIVLGSQ NSSNSRRLME LGSGGNKPSY
LVDGAHELNH AWFENVECVL ITAGASAPEV VVQDCIEYLR TNFGAKVDER TIREEHVSFP
LPKELRALQK LRIE