Gene Plim_3452 details

Gene Information

• Locus tag: Plim_3452
• ID: 9140170
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 4463358
• End bp: 4465490
• Gene Length: 2133 bp
• Protein Length: 710 aa
• Translation table: 11
• GC content: 51%
• Product: hypothetical protein
• Protein accession: YP_003631464
• Protein GI: 296123686

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.450939
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAACGA ATCGATATGC CATTTATGCT CTATTCGCTT TTTTGGTCAT AATGCTTTCC 
GAAGAAGCAG CATTCAGCAA TGACTCTAAA ACGATCTTTT CCACACAATC GGGAAGGTGG 
TCTTCAAAAG AAACCTGGAG TTCAGGGAAT CTCCCGGAAA CGGGAGATCG GGTTGTGATC 
CGCTCAGGCC ACCATGTGAT TTATGATATT GGCCACCAGG GCCGAACTCC CAGCTTTCGA 
CTGGTTCAGA TTGCAGGAGA ACTCGAGTTC GCTACTGATC AGAATACCTT GCTCGAAGCA 
GGACTCATTA CGATTATCTC CAGTGAAGAC CCCTCCGAAG AAGGCTTTGA CTGTCATGCA 
ACTCCACCTC CCGTAGGAGA AGGTCGCAGG CGTCCGGCAC TTTATGTCGG CAAACCCGGC 
GCTCCTTTAC CGGCTGAATA TACGGCCAAG ATCCGTCTAC GGTACTTTGA AGGTATGAAT 
AAACTTTCCT GCCCGGCTCT CGTGTGCTGC GGCGGACGTA TGGAAATTCA TGGTCAGCCA 
ATCGCACGCA CCTGGGTCAA GCTGAAACGC TCTGTGAATC CAGTGGAATC GACCGGACGT 
GGTGCCACGA CGCTCTCTTT AATGGAGAAT GTCGAAGGCT GGAAAGAAGG CGACCAGGTT 
ATAGTCACCA GCACACATCG TCAGCGGGAT CGCGAAGACG GCGATTTTCT CAGTAGTGCA 
CAAACAGAAG TTCGCAGGGT CGTGCGGACA GGCAGCCAGG ACTTTACGGG CGGATATCCA 
TTAACTCTCG ATAAACCATT GCAGCATGCT CATTTCGCTG ATGAGAACTT TCAGGCCGAA 
GTTGCAAATC TCACTCGAAA TGTCGTCGTT GAATCAGCGG AACCAGATGG AGTTCGAGGG 
CATACGATGT ACCACAGGCA CTCAGCGGGT TCAATCAGCT ATGCCGAATT CCGACATCTC 
GGTAAGCGAG ATGAGCTAGG TCGATACAGC ATTCATTTCC ATCTCTGTGG CGAAACGATG 
CGTGGCAGTT CCGTGATTGG CGCATCCATC TGGGACAGCC ATAACCGCTG GATTACGATT 
CACGGTACGA ATGCTCTCGT GATTCGTGAC TGCGTGGGCT ACAAGAGTGT CGGACATGGG 
TATTTTCTGG AGGATGGCAC AGAGGTCAAT AACATCCTGG ATCATAACCT GGCAGCTCTC 
GTATTCCCTG CCAAAACTCA AAAGGATCAG GTGGTACCAT TCGATCTGAA TCGAGGTGCA 
GGCTTCTGGT GGGCGAATTG TCACAATCAG TTCACTCGAA ATGTTGCTGC AGAATGTGCC 
GAGTATGGCT ATCGCTTTGA AAACAAGAAA ACTGCAGACT TCGATCCGAT CCTGTCTGTC 
CGTCAGCCGG ATGGATCGGT CAAGAGTGTT GATACACGTA TTCTGCCCTT TATACGTTTT 
GAAGGTAACG AAGCCCACAC CATGCGATTC TTCTGCCTGA ATCTGCGGGG AATCGCTCGT 
CCGGAGGGTG GCCGCCTGAA CTTTGTCGAG CAGAATCAAA CGCTGGCACG CGAAGCTGCT 
GAAGCTCTAC CACCCAATGG AACACCTTTT TGGATTAAAG ATTTCAAAGC CTGGGAAGCC 
AACTGGTCCG TCCATTTAGG AACGACAGGT GTCTTTATCG ACGGGCTCAA CTCCTACCGC 
TGCGATGTCG CTATCTGGCG TTCAGTGATG GATCGGTCAG GTTTCCGCCG GATGACTTCC 
CGTGAAATGC GTGTGAACGA TATTCATGGC CCGATCAGCA TGGGTGCTGT TCCTACTTCA 
ACAGCCAGCG AAAATGACGA AGGATACGCC TATGAAGCTC GGCTGCAGCC AGCTTCAGTT 
TCAAGTTTTA AAGATCAATT ACCGCCCGTA ACCGTCATCA CTTCCATTGT ACGCCAGGGA 
CAGTTATTGA AAGTCTGCGG CTCTGTCGCA GATACCAGCG ATATTCGACA CGTGCTCGTC 
AATGGTCAAA AAGCCCGCTC GTTACGGGGA AGTTTTGCCG AATGGGAAAT TGTGCTGGAA 
GCTCCAGCTA GCGGCCCCAT GGAATTGACG GCCATCTCTG AGGATATCAA TGGCCATATC 
GAACAAACGC CTCACATCGT TCGTCTCGAT TGA 

 

Protein sequence

MITNRYAIYA LFAFLVIMLS EEAAFSNDSK TIFSTQSGRW SSKETWSSGN LPETGDRVVI 
RSGHHVIYDI GHQGRTPSFR LVQIAGELEF ATDQNTLLEA GLITIISSED PSEEGFDCHA 
TPPPVGEGRR RPALYVGKPG APLPAEYTAK IRLRYFEGMN KLSCPALVCC GGRMEIHGQP 
IARTWVKLKR SVNPVESTGR GATTLSLMEN VEGWKEGDQV IVTSTHRQRD REDGDFLSSA 
QTEVRRVVRT GSQDFTGGYP LTLDKPLQHA HFADENFQAE VANLTRNVVV ESAEPDGVRG 
HTMYHRHSAG SISYAEFRHL GKRDELGRYS IHFHLCGETM RGSSVIGASI WDSHNRWITI 
HGTNALVIRD CVGYKSVGHG YFLEDGTEVN NILDHNLAAL VFPAKTQKDQ VVPFDLNRGA 
GFWWANCHNQ FTRNVAAECA EYGYRFENKK TADFDPILSV RQPDGSVKSV DTRILPFIRF 
EGNEAHTMRF FCLNLRGIAR PEGGRLNFVE QNQTLAREAA EALPPNGTPF WIKDFKAWEA 
NWSVHLGTTG VFIDGLNSYR CDVAIWRSVM DRSGFRRMTS REMRVNDIHG PISMGAVPTS 
TASENDEGYA YEARLQPASV SSFKDQLPPV TVITSIVRQG QLLKVCGSVA DTSDIRHVLV 
NGQKARSLRG SFAEWEIVLE APASGPMELT AISEDINGHI EQTPHIVRLD