Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3447 |
Symbol | |
ID | 9140165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 4457969 |
End bp | 4459648 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | glycosyl hydrolase BNR repeat-containing protein |
Protein accession | YP_003631459 |
Protein GI | 296123681 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATGCC TGCTGACGAG GATCTGCCTG GCGGTCACAC TGGGCTGCAT GACCTCGATG AACATGCTTG GTTTGATGGC CTCAGAGCCA GAGGTCACAA CTTCGGTCGT TGTCTATTCC GGCAAGGCGG CTGAGTTGAA ATGGATTGGT AAGCCTTGGG CATCGATCGA GGATCCCAAG GGCTCAACGA GCGCACTGCT GGCGAGTGGT CAGAATCGAT GGCTGCTCTC TCGAAGCGGG ATTGGCGCAG GTGATTTTCA GATTCGAGTG CGGCTGCAGC TGGCCAAACT GGATGGAACG GCTGCCGCCT TCGATTTCGG AAGCAGCCGC TTTGGTCTCG ATGGCAAAGC GGGCCTGCTG TTTGTTGAAG GGCCACTCTT TCGCAATCAA CCAGCTGCGA CGCTCAAAAT CGCAGACTTG GTACAGCCGG GTGCTCCGTT CTTGCTTGAA GTGATTCGAA AGGATGAACA AACCCGGTTT CTGATCAATG GCCAGTCGGT CTACACACTA GATGGCTGGA AAGGCTCTGT CGGTCGAGTG GGGTTGCGGC CGTGGCGCAA TGAGATGGCG GTGTTTGACT TCTCGATCAA AGGAAATCTT TACGAGTTGC CAGCACCACC TGAGCCTTTG TTTCCAAGTG GCTTTGCAGG TGGAACGGAG GGCTATCACA CCTTTCGGAT CCCTTCTCTG ACAACCACGC GCTCGGGAAC GTTATTGGCC CTTTGCGAAG GACGAAAAAA CTCGACGGGC GATAGCGGCG ATATCGACCT CGTCATGAAG CGATCGACCG ATGGAGGAAA GACATGGAGC CAGCCCGTCG TCCTCTGGGA TAATGGCGAG AATACTTGCG GCAATCCGTG CCTGGTCGTC GATCAAACGA CCGGAGAATT ATTGCTCCTG GCAACCTGGA ACCTGGGTGA TGATCACGAG AGCGAGATCA TTGCCCAAAC CAGCCGCGAT ACCCGGCGTG TGTACGTTCT GCGATCCAAA GACGACGGCT TGACCTGGAG CCAGCCGGTG GAGATCACCA AAGATGTGAA ACAACCCGAC TGGACGTGGT ATGCGACAGG GCCGGGTGGC GGAATTCAAA TTCAGCAGGG CTCCCACGCG GGTCGATTGG TCATACCCTG TGACCATATT GAAGCCAGAA CGAAAAAGTA CTACTCGCAC GTGATCTACT CGGATGATCA TGGGCAGACC TGGAAACTTG GCGGAAGCAC GCCAGCCGCC GGTGTGAATG AATGCGAGGT TGTCGAACTG ACTGGGGGAA AACTGCTGCT CAATATGCGT AATGCCAGTG CCAGCAGGCA GAGGCAAACG AGTATGAGCG AGGATGGCGG CCTCACCTGG AGTGAATTGA AATCTGACGC GGCACTCATC GAGCCTGTCT GCCAGGCAGC CATCCTGCGA GCCAGTTGGC CTGCCAGGTC AGAGCCGGGC TGGATCCTCT TCAGCAACCC TGCCAGCACC ACTAGCCGCA CAAATTTGAC AGTTCGCGGC AGTCGGGATG ACGGCCAGAC CTGGCCTGTC AGCAAAGTTC TGTATACGGG CCCAGCGGCT TATTCTGACC TGGCTTTACT TCCTGATGGA AAAGTCGGCT GCCTGTTTGA AGCGGGTGAA GCCAACTACG CCGAGTCGAT CGTCTTTGTG ACATTCGGGC TGGATGAATT AACAACGTGA
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Protein sequence | MQCLLTRICL AVTLGCMTSM NMLGLMASEP EVTTSVVVYS GKAAELKWIG KPWASIEDPK GSTSALLASG QNRWLLSRSG IGAGDFQIRV RLQLAKLDGT AAAFDFGSSR FGLDGKAGLL FVEGPLFRNQ PAATLKIADL VQPGAPFLLE VIRKDEQTRF LINGQSVYTL DGWKGSVGRV GLRPWRNEMA VFDFSIKGNL YELPAPPEPL FPSGFAGGTE GYHTFRIPSL TTTRSGTLLA LCEGRKNSTG DSGDIDLVMK RSTDGGKTWS QPVVLWDNGE NTCGNPCLVV DQTTGELLLL ATWNLGDDHE SEIIAQTSRD TRRVYVLRSK DDGLTWSQPV EITKDVKQPD WTWYATGPGG GIQIQQGSHA GRLVIPCDHI EARTKKYYSH VIYSDDHGQT WKLGGSTPAA GVNECEVVEL TGGKLLLNMR NASASRQRQT SMSEDGGLTW SELKSDAALI EPVCQAAILR ASWPARSEPG WILFSNPAST TSRTNLTVRG SRDDGQTWPV SKVLYTGPAA YSDLALLPDG KVGCLFEAGE ANYAESIVFV TFGLDELTT
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