Gene Plim_3446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3446 
Symbol 
ID9140164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4456281 
End bp4457903 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content54% 
IMG OID 
ProductSerine/threonine protein kinase-related protein 
Protein accessionYP_003631458 
Protein GI296123680 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGAAG ATTTCCGCAC GGAACATGTT GAGTCAGGTC ATGAGGTGCT TTCGGGAAAT 
GGAGAAGCAC AGGGAATTCT GGTTTCCATC GAGCAGATCG CTTCCTTGAG TCGCGATATC
GAAAAAACGC TGCTCATGAC ACAGCCTGGA GTGTTGACGA CTGAAATCAG TCCGGAAACT
TTGCAGCGTA TGCAGCAGAT TCTGCAGAAT CTGGCTCCCG GATTGACACC TCCTTCGACC
GAAGAACTGC ATGTGGTCGA TCTCCCACCA TCGATCGGTC GATATCGAGT GACCAAGGTT
TTGGGGCGAG GCGGGTTTGC AGTCGTTTAT GCAGCGCATG ATCCGCACTT GAACCGTGAA
GTGGCCATCA AGGTGCCTTT GCCGTATCGG CAACTGACAC CCGATGCGAG GCAGCGATTT
CTTCTCGAAG CTCAGGCAGC CGCCAGGCTG GATCATCCGC ACATTGTGCC CACCTTTGAA
ACGGGTTCAG CCGGTGAGTT GCCCTACATT ACTTATGCTC TCTGCCATGG GCCCACATTG
TTTCGCTGGT TAAATCGCCA TGGGCCATTG TCCCCGCGTG CGGCTGCCGA ACTGGTGATG
CAATTGAGCC GAGCGGTCGC TTACAGCCAT CAGCAGGGTG TGCTTCATCG CGATTTGAAA
TCGGCAAATG TGCTGTTGTT CCCGATCACA GATGCTTTCG CAAATTCCGA AGCAGAGTTT
CCATTCATTC CGCGACTGAC TGATTTTGGT CTCGCAAAAG TGCTCGAAGG AACTTTGGTC
GAAACCTGCT CCAGCGTCAT TATGGGAACG CCCCATTACA TGGCGCCGGA GCAACTCGAA
AAAGGGCTTC GCGGTTGCAC CCCTGCGACA GATGTGTTCG GGCTGGGGAC GATTCTGTTT
GAATGTCTCA CAGGAAAGCC GCCTAACCAA GGAGAAACTG TCATTGAGAT TCTGGCTTCG
ATCCGTGAGG GCGAAATTTC GCACGTCAGC CAGTTTCGTC GGGATGTTCC CCAGGATCTC
GTCAGAGTTT GCGATAAAGC CCTCAGCTTT TTGCCGGAAG ATCGTTATGC CACGCCGCAG
GAACTGGCAC AGGATCTGGC GCGATTTCTG TCGCATGAAT CGGTGCTGGC GACCGGGCCC
AACTGGCAGA CACGCCTCTG GCGAGCAGCC CGGCATCCCG CGCGAATTGC CGATGCCGCC
ACGTTTATCA TCATGAGTAA TCTCGCCATT ATGGCGTGGA TTACGATCTT TCCCATTTCG
ATTTTGCTGG GCCTGGCATT CACCCACACT GTTGAACTCG GCCAACTGAT GCCCCATACA
GCGCCATTGT GGATCTTCCA CTTTCTCATG GTTGTTCTGG GATATCTGAT TGGTCGAAAG
TCGCTCTGGG CAGCGATGGC TTCCACCATC AGTGGAGCCG TGCTGACACT CTTCATCTGG
TCGGTCCTGG CAAGGTGGAT CACGCCGCCC TATCCCGCGA TTTACTCGGA TGACAAAGCC
CGGGACATCG TCTTCGTCCT GCTGCTGGCG ATTTTTGGAG CACAAATGAT ACTGAGTGCT
TGTGCCTGGC TGGCACTCAG GACACTTTCG CTCAAAAACC GTCAGCCCAG TACAGTTGGC
TAA
 
Protein sequence
MPEDFRTEHV ESGHEVLSGN GEAQGILVSI EQIASLSRDI EKTLLMTQPG VLTTEISPET 
LQRMQQILQN LAPGLTPPST EELHVVDLPP SIGRYRVTKV LGRGGFAVVY AAHDPHLNRE
VAIKVPLPYR QLTPDARQRF LLEAQAAARL DHPHIVPTFE TGSAGELPYI TYALCHGPTL
FRWLNRHGPL SPRAAAELVM QLSRAVAYSH QQGVLHRDLK SANVLLFPIT DAFANSEAEF
PFIPRLTDFG LAKVLEGTLV ETCSSVIMGT PHYMAPEQLE KGLRGCTPAT DVFGLGTILF
ECLTGKPPNQ GETVIEILAS IREGEISHVS QFRRDVPQDL VRVCDKALSF LPEDRYATPQ
ELAQDLARFL SHESVLATGP NWQTRLWRAA RHPARIADAA TFIIMSNLAI MAWITIFPIS
ILLGLAFTHT VELGQLMPHT APLWIFHFLM VVLGYLIGRK SLWAAMASTI SGAVLTLFIW
SVLARWITPP YPAIYSDDKA RDIVFVLLLA IFGAQMILSA CAWLALRTLS LKNRQPSTVG