Gene Plim_3433 details

Gene Information

• Locus tag: Plim_3433
• ID: 9140150
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 4445241
• End bp: 4445945
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 56%
• Product: ABC transporter related protein
• Protein accession: YP_003631445
• Protein GI: 296123667

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAATC TATCAACGCC GTCAGGTCAC CCGGCACTCG TCGTCCAGGA TCTCTCGCGT 
GAATTCTCGA ATGGCTCCGA GACGCTGCAC ATTCTTCAAG GTGTCGGATT CACTGCCAAT 
ACAGGAGAGG CGATCGCGAT TACCGGCCCT TCAGGATGTG GAAAGAGCAC TCTATTGCAG 
ATCCTGGGTG TGCTCGATCA TCCGACATCG GGAACAGTCA GTCTTGATGG CGAAGATCCC 
TTTGCGATGG ATGTGACTCA ACAGGCTCAA TTTCGAAACG AAAAGATTGG CTTCATCTTT 
CAGGATCATC ACCTGTTGCC TCAGCTCACG GTGCTGGAGA ACGTCCTGTT ACCAGCTTTG 
CCGCATCGTG GCATCTCGAA TGAAGTCCGA GAGCGGGCTT TGATGTTACT GGATCAGGTC 
GGGCTGACAG CGCGGATGGA CCATAAACCG ACCCAGCTTT CAGGGGGGGA ACGACAACGG 
ACGGCCGTCT GCCGGGCGCT GATCAATCGC CCGCGGCTGC TCCTGGCCGA TGAACCGACA 
GGGAATCTCG ATCCTGCGAC GGCCGAGACA GTGGGGAAGT TACTGGTCGC TCTGGCGCTG 
GAGTCACACA GTATTCTGCT CTGCGTCACT CATAGCGAAG CCATGGCTCA ATCGTACCCC 
CGCCGCTGCT ATTTGAAAGC AGGTCAACTC GTTGAGAATC AGTGA 

 

Protein sequence

MTNLSTPSGH PALVVQDLSR EFSNGSETLH ILQGVGFTAN TGEAIAITGP SGCGKSTLLQ 
ILGVLDHPTS GTVSLDGEDP FAMDVTQQAQ FRNEKIGFIF QDHHLLPQLT VLENVLLPAL 
PHRGISNEVR ERALMLLDQV GLTARMDHKP TQLSGGERQR TAVCRALINR PRLLLADEPT 
GNLDPATAET VGKLLVALAL ESHSILLCVT HSEAMAQSYP RRCYLKAGQL VENQ