Gene Plim_3421 details

Gene Information

• Locus tag: Plim_3421
• ID: 9140137
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 4430181
• End bp: 4432169
• Gene Length: 1989 bp
• Protein Length: 662 aa
• Translation table: 11
• GC content: 56%
• Product: asparagine synthase (glutamine-hydrolyzing)
• Protein accession: YP_003631433
• Protein GI: 296123655

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGTGGGA TTTGTGGTTG CGTCGAAACC ATTGGTCATG ATCAAGCGGG AATCGCCAGC 
ACAAAGGCCA AATCCCGTGT CGAATCGATG CTGCGCCAAC TCGCTCATCG CGGCCCGGAT 
GGTTCCGCGA CTTTCTCGAC GAACTTTGCC AGCCTGGGTC ATGCACGTCT TTCGATCATC 
GATCTCGCGG GTGGTGCCCA GCCACTCTTT AACGAAGACC GCACACTCGC ACTTGTTGCG 
AATGGAGAAA TTTACAACCA CCAGGAAATC CGCCAGGAAC TCCTCTCGCG TGGTCATCAC 
TTCCGCACGG GGAGCGATTG CGAAGTCATT GTCCACCTGT ACGAAGAAGT GGGCACTGCC 
TGTCTCGATG AACTGCAGGG GATGTTCGCC TTCGCGATTC TCGATACCAG GCAGAAAACA 
CTCTTTGCTG CCCGCGACCG CTTTGGTCAG AAACCGTTCT ATTACTCGTG GCAGGCTGAA 
CGATTCTCAT TCGCCTCAGA AGCTTCAGCA CTGCTCCCAG TCGGCGAGGC AGTATCTCAA 
GAACCCGCTC CCATCGATCC TGTGGCGCTG GATCAATACC TTTACTACCA ATTCGTCCCT 
GCTCCCCGGA CGTTGTTTGA GAATGTCAAA GCACTCCCTG CCGGTCATGC CCTTAATCTC 
CAGTTCAGCG AACCGGCAGC CGATACAGCC ACTTCGGAAC TGAGAACCTG GGCGTGGTGG 
TCGCCTCCTG TCCCGAGGCG TTGTTCTGCG ACGTCATCGA CCGCAGACTT CTGGCTCAAC 
GATCTTGAAG CAGTCATCGA TGAGGCCGTT CGCTCACATC TGCTGGCTGA TGTCCCTGTG 
GGCCTCTACT TGAGTGGTGG CATTGATTCT TCACTTCTGG GAGCGTTGGC CTGCAAGCAT 
ATCCATGGCC GGATGCCGGC CTTCTGCATT TCGTTCCCTG GCTCATCGAT GGATGAACAG 
GCCGCGGCTC TCTGTGCCGC CCGGCATCTG GGGTGCGATC TGGAAGTGGT TGAGTTTCAC 
GATGAAGACT TTGTGGAACT CGTCGAAACC AGCGGGCAGC TACTTGATCT TCCCCTGGGA 
GATGCGGCGT TACTTCCTTT ACTCAAATTG AGCCGCGTCG CCAGCCAGAC AGTCAAGACA 
GTGCTGACAG GTGATGGTGG TGATGAACTG TTTGGTGGAT ACCGCAAGTA CCGCGAGTCC 
GCGCAAGTTC CTCAATGGTG GCAGAATCTG CATAACATCT GGGGAGCTGC GCTCCCTGTT 
GAGCGACTCC TCTCTGTCGA CGGCTCCTTC AGTGTATTCC GTCATTTCGT CCTCTGGAGT 
GCGCGGAACA TTTTCTCCAG TCGGCGAGCT GATCTTCGCA AGCGAGGTTT CGACCCTCGG 
CAGCGTGCCA GCCTTTATCG ATCAAGTTTT AAGGCTTTGC TCGGAGAGAC GTTTGAGCTT 
CCCGAGCGAA GTCGCCATGA GGGCTTGACG TGGCTCGATC GGGCATTGCT CGACGATCAA 
GGCACGAATC TGGCGGATCG ACTCCTCTTC AAGGGAGATC GCGCGACGAT GGGCTATGGT 
GTCGAAGCCC GGGCACCATT TCTGGATCAT CACGTGGCCG AATTCGCTGC GACACTTCCG 
GCGAACTGGA TGATTCGCAG CAAAGAAACC AAGTACGCTT TGCGAGCACT GGCCCGCCGC 
CATTTGCCTG CCGAGATCAC CGAGCGACGC AAAAAGGGTT TTTCGTTGCC ACTCAAGACG 
TGGTTTGCCA CATCGCTGGC CGATTGGCTG CATGACAAAC TGCTGGCTCC TCACTCACTT 
TGGGATGAAC TCTTCGAACC CTCTGCCATT GAGCAGCTTT TGCGCGAGCA TCGCTCAGGC 
CGCGATAACC ACGCCGACAG ACTCTATAGT CTGCTCGTAC TCAAAAACTG GATGTGCCAG 
AAGGCGACAT GTGCAGCCAC CGATCAGCAC TCGCCGAGCT TCATGCCCGT CGAAAAACAG 
GCCGCATAG 

 

Protein sequence

MCGICGCVET IGHDQAGIAS TKAKSRVESM LRQLAHRGPD GSATFSTNFA SLGHARLSII 
DLAGGAQPLF NEDRTLALVA NGEIYNHQEI RQELLSRGHH FRTGSDCEVI VHLYEEVGTA 
CLDELQGMFA FAILDTRQKT LFAARDRFGQ KPFYYSWQAE RFSFASEASA LLPVGEAVSQ 
EPAPIDPVAL DQYLYYQFVP APRTLFENVK ALPAGHALNL QFSEPAADTA TSELRTWAWW 
SPPVPRRCSA TSSTADFWLN DLEAVIDEAV RSHLLADVPV GLYLSGGIDS SLLGALACKH 
IHGRMPAFCI SFPGSSMDEQ AAALCAARHL GCDLEVVEFH DEDFVELVET SGQLLDLPLG 
DAALLPLLKL SRVASQTVKT VLTGDGGDEL FGGYRKYRES AQVPQWWQNL HNIWGAALPV 
ERLLSVDGSF SVFRHFVLWS ARNIFSSRRA DLRKRGFDPR QRASLYRSSF KALLGETFEL 
PERSRHEGLT WLDRALLDDQ GTNLADRLLF KGDRATMGYG VEARAPFLDH HVAEFAATLP 
ANWMIRSKET KYALRALARR HLPAEITERR KKGFSLPLKT WFATSLADWL HDKLLAPHSL 
WDELFEPSAI EQLLREHRSG RDNHADRLYS LLVLKNWMCQ KATCAATDQH SPSFMPVEKQ 
AA