| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3419 |
|---|
| Symbol | |
|---|
| ID | 9140135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 4426682 |
|---|
| End bp | 4428262 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_003631431 |
|---|
| Protein GI | 296123653 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACCG TCCGATTTGC CTTAATTCTC AGTCTGGGCT GGCTGGCTCT CTTCTCTCCT
GATGTTCAGA TCTCACCTGC TATGGCGGCA GAAAAGGCGG CACCGCCCAA CATTCTGTTC
ATCTTCAGCG ATGACCTTGC CTATCAGGCC ATCAGTGCCT ATGGAGACGA GCGAAAGCTC
CTCGAAACAC CTCATATCGA CCGTGTGGCG AAAGAGGGGA TCCGCTTTGA TCGCTGTGTC
GTCACGAACT CGATCTGCGG GCCTTGCCGT GCCACCATTC TGACAGGCAA GTACTCGCAT
AAAAACGGGT TCTACAACAA CACCAACTCA CGCTTTGACA GCACCCAAAC GACATTCCCT
AAGCTGCTCA AATCGCAGGG GTACAGCACG GCACTCATTG GCAAATGGCA CCTCATCAGC
GAACCCACAG GCTTTGATCA TTGGGAGATC CTGCCAGGGC AGGGCATCTA TTACAACCCG
CCCATGATCG CCAATGGCCA GAAGGTGCAG CGAGAAGGCT ACGTCACCGA CATCATTACG
GATCGATCGA TCGACTGGCT GAAAAATCGC GACAAATCCA AGCCCTTTCT GCTGATGGCA
CAGCATAAGG CTCCGCATCG CGAATGGTCG CCTGCACTCA GGCATCTGGG GTTCAACAAA
GACAAACCGT TTGCCGAACC CGCGACGCTC TTTGATCAGC ACAAAGATCG CGCTCAGGCA
GTCGTTGATC ACGATATGGG GATCGACCGC ACCTTCACCA AGCTCGATGC CAAACTCGTC
CCGCCTCCCG GCATCAACAG CACTCAACTC GAAGAATGGA ACAAGTACTA CCTGCCGCGT
AATAACGCCT TTGAAGCAGC CCATCTTCAA GGTCAGGATC TCGTGCGCTG GCGCTATCAA
CGGTACATGC ACGATTATCT GGCCTGTGTG AAGGCCGTCG ATGAAAGTGT GGGCCGATTA
CTCCAGACGC TCGATGAAGA AGGCCTTGCC GAAAACACAC TCGTGGTGGT TTCATCCGAT
CAGGGCTTTT ATCTGGGTGA ACATGGCTGG TTCGATAAAC GCTGGATCTT TGAAGAATCT
CTGCGGACAC CTCTGCTCGC GCGCTGGCCA GCCGCTATTC CTGCAGGCCG CACGAATGGA
CAGATTGTCT CGCTGCTCGA TATTGCCCAG ACATTCCTCG ATGTCGCAAA AATCGACGCA
CCAAACGACA TGCAGGGGGC CAGCCTCCTG CCACTGCTGA AAGGGGATAC GCCCGCTGAC
TGGCGAAAAT CGCTCTACTA TCGCTACTAC GAATACCCTT CACCTCACCG CGTCAAGCCG
CATTATGGCG TGGTGACTGA TCGTTACAAA CTCGTGCATT ATGAAGGGAC TGGTGAAGGC
GAATGGGAAC TGCTTGATCG ACAGGTTGAC CCCCAGGAAG TCAAAAGCTT CCATAACGAC
CCGGCCTATG CCCAGACCAT GACAGAACTC AAAGACGAAA TTCGACGTCT CCAGAAAGTG
GTTGACGATC AGACGCCACC TCCCGCTAAG GCTTATGGGA ATGCTCCGCT CGAATGGTCC
CCCTTCGGCC CATTGAAGTA A
|
|---|
| Protein sequence | MNTVRFALIL SLGWLALFSP DVQISPAMAA EKAAPPNILF IFSDDLAYQA ISAYGDERKL
LETPHIDRVA KEGIRFDRCV VTNSICGPCR ATILTGKYSH KNGFYNNTNS RFDSTQTTFP
KLLKSQGYST ALIGKWHLIS EPTGFDHWEI LPGQGIYYNP PMIANGQKVQ REGYVTDIIT
DRSIDWLKNR DKSKPFLLMA QHKAPHREWS PALRHLGFNK DKPFAEPATL FDQHKDRAQA
VVDHDMGIDR TFTKLDAKLV PPPGINSTQL EEWNKYYLPR NNAFEAAHLQ GQDLVRWRYQ
RYMHDYLACV KAVDESVGRL LQTLDEEGLA ENTLVVVSSD QGFYLGEHGW FDKRWIFEES
LRTPLLARWP AAIPAGRTNG QIVSLLDIAQ TFLDVAKIDA PNDMQGASLL PLLKGDTPAD
WRKSLYYRYY EYPSPHRVKP HYGVVTDRYK LVHYEGTGEG EWELLDRQVD PQEVKSFHND
PAYAQTMTEL KDEIRRLQKV VDDQTPPPAK AYGNAPLEWS PFGPLK
|
|---|
| |