| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3418 |
|---|
| Symbol | |
|---|
| ID | 9140134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 4425477 |
|---|
| End bp | 4426502 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | 3'(2'),5'-bisphosphate nucleotidase |
|---|
| Protein accession | YP_003631430 |
|---|
| Protein GI | 296123652 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.809192 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATT ATTCTCACGA GTTATCGCTG GCGCTCACCG CTGTCCGCAA TGCAGCGGAA
ATCTGCCAGC TTGTCCAGCG GCGGATTGGC CATTCTGCCA TGGCCAAGTC TGACAAAAGC
CCCGTCACGA TGGCCGACTT TGCCAGCCAG GCGGTCATTC TCGAAACCAT CGGCCGAGCC
TTCCCGAACG ATTGCCTCGT CGCTGAAGAA ACTTCGACCG AACTGCAGCA GGAGCCGGAG
CTGCTTGGTG AAGTGACGGC TCTCGTTCAG CGATTTCATC CGCAGGCGAC CAGCCAAAAT
GTCTGTGAGT GGATTGATCG TGGCGACGGC GAGGGAGGTT CTCGCCGCTA TTGGACACTC
GACCCGATTG ATGGCACCAA AGGCTTTCTT CGCAAAGAGC AGTACGCGAT TGCTCTGGCC
CTGTACGATG ATGGGCAGCT CGTTCTCGGT GTGCTGGGTT GCCCCAATCT CCCGGCTGAT
CCCGCCCGAA ATCTCATCAA TCCCGAAATC ACTCCCATCA ATCAGGCTCA GGGAGGATTG
TTTTATGCTG TCCGTGGAAC AGGGGCCTTT GTGACCTCGC TCGATGGCCA TCATCTTCCC
CGGCCCATTC ATGTTTCCAC ATCGCACAAT CTGCACGAGT ACCGCGTGTG TGAATCCGCC
GAGGCCACCC ACAGTCGGCA CGATGCTTCC GCCACGATTG CCCAGTCTTT AGGAGTCGCT
GGCGAACCCG TGAGAATGGA CAGCCAGGCC AAGTATGCCT GCGTGGCCAG TGGCAGGGCA
GAGATCTATC TTCGCCTGCC CACTCGCGCC GGTTACAGGG AATGCATATG GGATCATGCG
GCTGGTGTGA TGGTCATTGA AGCCGCCGGT GGCAAAGTGA CGGATACCAC AGGAAAAGAA
CTCGACTTTT CACAGGGCCG GCATCTTTCC GCCAATATTG GAGTTGTTGC CACAAATGGA
ATTCACCACG AGAAAATCGT GGCCGCCGTC GTGGCACAGC AGCAGAGTTT GGCAGCTCAG
CAATAA
|
|---|
| Protein sequence | MIDYSHELSL ALTAVRNAAE ICQLVQRRIG HSAMAKSDKS PVTMADFASQ AVILETIGRA
FPNDCLVAEE TSTELQQEPE LLGEVTALVQ RFHPQATSQN VCEWIDRGDG EGGSRRYWTL
DPIDGTKGFL RKEQYAIALA LYDDGQLVLG VLGCPNLPAD PARNLINPEI TPINQAQGGL
FYAVRGTGAF VTSLDGHHLP RPIHVSTSHN LHEYRVCESA EATHSRHDAS ATIAQSLGVA
GEPVRMDSQA KYACVASGRA EIYLRLPTRA GYRECIWDHA AGVMVIEAAG GKVTDTTGKE
LDFSQGRHLS ANIGVVATNG IHHEKIVAAV VAQQQSLAAQ Q
|
|---|
| |