Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3400 |
Symbol | |
ID | 9140116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 4400111 |
End bp | 4404232 |
Gene Length | 4122 bp |
Protein Length | 1373 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | Serine/threonine protein kinase-related protein |
Protein accession | YP_003631412 |
Protein GI | 296123634 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGCCG AGAATAGACC GGCATCACCG AAGTCTCCCG AGAGCGCGCC CAAAGATGCG ACGCCTGTCT CTATTCCTAT TGTCTCTGCC CGCGAACGTT TGGATGCTCT CAAAGAACTC GGCCGCTACA AAATCGAGCG CAAGCTCGGT CAGGGAGGCA TGGGAACTGT CTTCTTGGCC AGGGATACGG AACTGAAACG TCTGGCTGCG ATCAAGATCC TACCCGAAGA CAAAGCCCAG AACCCGATTC TTGTCAAACG CTTCCGTGCC GAAGCCCAGG CAGCGGCTCA ACTGCGACAC GACAACATTG TGACAGTCTA TGACAGTGGT GAGCAGGATG GGTTGCTTTA CATTGCCATG GAATATGTCG ATGGCCCGGA TGTCTTTGAC CTGATTCAAA AGCGCGGACG CATTGCTCCC CGCAGATCGT TGGACATCAT CCGCCAGACC ACACTGGCGC TGCAGCATGC TTACGAAAAG AATATTGTTC ATCGAGATAT CAAACCCTCG AACCTGATGA TCCGGCGGGA TGGTGTTGTC AAAATCACCG ATCTGGGTCT GGCCCGTTCG ATTGATGAAA CACTCGAAAC AAATATCACG CGTGCCGGTA CCACGGTCGG CACGGTCGAT TACATGTCTC CCGAGCAAGC CCGCAACAGC AAGCTGGCCG ATATCCGCAG TGATATCTAT TCACTGGGGT GCACCTGGTA TCACATGCTC ACAGGGACAG CTCCTTATGC CGAAGGTGCT GTCACCAACA AATTGCATGC ACATGCGGTC AAACCCATTC CTGATCCACG CGATATCAAT CCCGAGGTTC CTGAAGGTTT TGTCGCGGTT CTGCAGCGGA TGATGGCGAA AAAGCCAGCC GACCGATATC AGACGCCTGC TGAACTTCTC AAAGATCTCG ATGCCCCTTC ACTGAAGCGA GTCAGTGCGG CTGATGAAAT TGCCCGCGAA GTGGCGCGAG AACTGGAATC TGATGAAGCT CTGACGCCTG CCAGGGAAAA CGTTTCCAGT TCCGGTCGAC AAAAACTTGC CACTGCTGGA GGACAATCGT CGTCGGGTGG GTACTCGCGA CCCGTTGAAC ATCGAGAATC CCGAAATGCC GATGGCCGGG AAGAAGGTCA TAAGCCCTCG ACCTTGCCAC CCCGGCGTGC ACCGGCTGGG GGCGATCCTT CCACCCCGAT TTCTTTTGAC TTCCGCAAGC TCGTCATCCC ACTGGTGGCG ATTGCAGGTG TGGGAGCACT CATCTGGTTC GGAAAGACAT TGGCCGATTT TGGCAATGTC TTTGGACTTG GCAGCACACC CGTACCGGCA CCCGTACAGG GTTCATTCTT TGAAAACAAT GGATCAGAGA CGGAAGTCAC CACTCCCACT CAGGTGACAC CGGCTGAAGC TGCAGCCGGT GCAAACCAGT CTGCGACAGG TACGAATCCA TCGACAGGTC AGAATTCCGC TCAAGCTCAA CAGGCCGGGG CAAGCAACAA CATGTCTCCG GCCACGACGG CTCCGCTCAT CGTGCCTGAG CAAGCGAGAA TTGCGGAAGT TCCCAAACCC TCGCTGACAG AACTTCCCCG CTGGACACTC GAACCTTTTT CTCAAACCGG TTTGCCAGTG ATTACTGTCT CTACCTCGGC AACCGGCCCG GGGACAGCCA AAACCATCAC TGAAGCGATC AAACGAATTC CTCCGGCAGG CGCGATCCTG AAGCTCTCCT CGAAAGAGCG TCACGACCTT CCCGCTGGCT TATCCATTCG CACCGAACGG CTGCTGATTA CGGGTGATCA AGGCTTTGCC ACAATTCATC TGCTCCCCGA ATCTGATGCT TCATCCGAGA CCTCGGGAAA GAAAAACACC ACAGGCGAAG CTGCTCCAGG AAATGGCGTT AAGCCACTCG TCTCTGGCCT GACCATCATT TCTAAACAAG TGCAGTTGGA AAAATTGCAC TGGCTGGCGG AGGCGGATGT CTCAACGAGC CTGAATGCAC TGGTTCGTGT TGAATCCCCC CGGCTGACAG TCCGTGAATC CTCAATGACG GCCCTCCTCG GATCCAATGC CAATCAAGAG CGTGCGCCGG AGAGTCTGCT CACTGCAGTT GACTGGCAGA ACACAGCGAA CGGTGCCACG TTCGACCGTG GCGGACAATT GCTGATCGAT ACGTTGTTCA CTCGTGGTGC ACAACTGGGG GCAGTCTCCA TTTCTGGCGG TGCCAGCCAG AGCGTGCTGA GGCAATCCTT GTTTTTAGGT GGTGCTGTTC CGCTGGTGCG AATGAATCCT GCCGGTTCGA ACGGCAGCCC GAATGTCGGC ACCAATGGGT CCGAAGTTCG CCGGGCATTG CTTCTCCAGC ACGTCACCGC TTTGACGAGT GATTCGATCG TTGAGATTAA GCCACCTGCC GATGGTCAAC CTGTTGATGG TTTGTGGCTG GGTCTGTCGG AGAGCGTGTT TGCTGGGATG TCGACAGGTA AGAAGACTTC ATCGCTGATT CGAGCGGCTG GTTGGCCGCA GAATCCGAAT CGTCAGGCCG ATGAATCGCG CCTTGTCGAT TTTTCGATTG CCAGCGAACG CAACCTGTGT TGTGGATTAT CGAGATTATA CGACTCGGGT GAAAGCACAG GGCTGCAGGT GACAGACCCT CTGACCTGGA GAAGATTCTT TGCCACTGAT TTTGATGGGC AGGCTCGACC AGAGTTGTGG CCTGGGAATT CACTCCCGGT GAATCCTGCT GAAATCGAAA AATGGTCGCC GGCACTGGTC GATACATCGG CCATCCCAGA CGCTCCGCTC TCGAAAATCT CAGCCATACT GGGCTGTGAT GTCACTCTTC TTTCGACCCC AGCTTTGACC GATCAGAGTT GGTCAAAAGT TTCGACACCA CTGCTCAAAC TCAGGCAGCA ACTGGACCCT GCAAATCCTA AAGAGACGAC CACACTCGAT CTTGCCACTT ACGGGAACGA TCTGGGCCAG CTCCTTTCGC GGTCGGATAT ACCTCAGAAC GGGCATCTGG AAATCACCGG GTTTGGCATC AGGACGATGA CCCCTGTCAT TCTCAAGAAT CGACGGCTGA TCCTCACGTT TAACTCTCCG CCGGATAAAG CCCCGCTGGT CATCCAACCC AAACCTGCTG GTGATAAGAA AGGCCTCTTT GAAGTCGAGG GAGGCTCGCT GGAAATTCGT CATGCAGTTC TAAGAGGAGT TGGCGGTGGA AAACCGGCAC CCGAGAACTT TTTCGTCAGT CGAGGTGGCA CCATCATCTG CCGCCATGTG AAAATCGAAG GCGGGATGAC CGAAGACTGG CAACCGAAAG ATATCTTCCA TTTGACCGGC AGTGGCAAAG GCGAACTCAA TCTGGGCTTT GTCGAATCCG TGGCTCAATC TCCCGGTCGA TTTGCAGCTT TGCAAGGTGT GCAATCTTCA GCCCTGCTGC TGCAATCTGG CATTGTGAGT GGTGTGGCCA ATTTTCATGT GGAGCCGGGT CTTTCGAGTG GTACAGACTG GCATCAGATC GATCTCAGGC ATGCGACGTT ATTGGCAGGA GAAGGTGTTT TTCGCCTGTT TGGCACCGCA GAGGATTTTC GCTATCCACC GGTCATCACA CCGGATGATC AGCGGAAGTC AAAGCCCCAG GGCAGTGTTC GCATCGTGAC AGATACCAGT ATCCTGGGGA AACTCAGTGG CTTTGGCCGC TCGGGCCAGC CGGCGGCACT GATCGAAGTT CCCGAACTGG CCGATCTCAC CCGCTGGGCT GAATGGCATA GTCGTGAAAC AGCGATCGGG CCACTCCCTG ATCTGCTGAT TCGCTCAGCC AGACGACAGA TTCCCCTGGA ATCCACTGCG TGGCAAAAAG CGTGGACGAA CCCCTCGAAC ACCAATCTGA TCATGTCACC CGGGTTCGTG ACGTTTGCGA AAAACTGGCC CTCGCAGCCG CGAGAATGGA AAGAGTTGCT CGCCAGCCAA TTCCAGCTTT CTGCTGCTGC CAAAGCCGCT AAAGCGGGCG AGGGAGAACT CCCCCTGGGT GTCACGATGG AGGCGCTGGA GGAAATTGGC CCGCTCAAGA AAGGGAAGCC CGCCGCTACC AACACAGAGA AGTCGAATAC CAAAACCAAT CCCGGTTTTT AG
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Protein sequence | MPAENRPASP KSPESAPKDA TPVSIPIVSA RERLDALKEL GRYKIERKLG QGGMGTVFLA RDTELKRLAA IKILPEDKAQ NPILVKRFRA EAQAAAQLRH DNIVTVYDSG EQDGLLYIAM EYVDGPDVFD LIQKRGRIAP RRSLDIIRQT TLALQHAYEK NIVHRDIKPS NLMIRRDGVV KITDLGLARS IDETLETNIT RAGTTVGTVD YMSPEQARNS KLADIRSDIY SLGCTWYHML TGTAPYAEGA VTNKLHAHAV KPIPDPRDIN PEVPEGFVAV LQRMMAKKPA DRYQTPAELL KDLDAPSLKR VSAADEIARE VARELESDEA LTPARENVSS SGRQKLATAG GQSSSGGYSR PVEHRESRNA DGREEGHKPS TLPPRRAPAG GDPSTPISFD FRKLVIPLVA IAGVGALIWF GKTLADFGNV FGLGSTPVPA PVQGSFFENN GSETEVTTPT QVTPAEAAAG ANQSATGTNP STGQNSAQAQ QAGASNNMSP ATTAPLIVPE QARIAEVPKP SLTELPRWTL EPFSQTGLPV ITVSTSATGP GTAKTITEAI KRIPPAGAIL KLSSKERHDL PAGLSIRTER LLITGDQGFA TIHLLPESDA SSETSGKKNT TGEAAPGNGV KPLVSGLTII SKQVQLEKLH WLAEADVSTS LNALVRVESP RLTVRESSMT ALLGSNANQE RAPESLLTAV DWQNTANGAT FDRGGQLLID TLFTRGAQLG AVSISGGASQ SVLRQSLFLG GAVPLVRMNP AGSNGSPNVG TNGSEVRRAL LLQHVTALTS DSIVEIKPPA DGQPVDGLWL GLSESVFAGM STGKKTSSLI RAAGWPQNPN RQADESRLVD FSIASERNLC CGLSRLYDSG ESTGLQVTDP LTWRRFFATD FDGQARPELW PGNSLPVNPA EIEKWSPALV DTSAIPDAPL SKISAILGCD VTLLSTPALT DQSWSKVSTP LLKLRQQLDP ANPKETTTLD LATYGNDLGQ LLSRSDIPQN GHLEITGFGI RTMTPVILKN RRLILTFNSP PDKAPLVIQP KPAGDKKGLF EVEGGSLEIR HAVLRGVGGG KPAPENFFVS RGGTIICRHV KIEGGMTEDW QPKDIFHLTG SGKGELNLGF VESVAQSPGR FAALQGVQSS ALLLQSGIVS GVANFHVEPG LSSGTDWHQI DLRHATLLAG EGVFRLFGTA EDFRYPPVIT PDDQRKSKPQ GSVRIVTDTS ILGKLSGFGR SGQPAALIEV PELADLTRWA EWHSRETAIG PLPDLLIRSA RRQIPLESTA WQKAWTNPSN TNLIMSPGFV TFAKNWPSQP REWKELLASQ FQLSAAAKAA KAGEGELPLG VTMEALEEIG PLKKGKPAAT NTEKSNTKTN PGF
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