Gene Plim_3399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3399 
Symbol 
ID9140115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4396495 
End bp4399155 
Gene Length2661 bp 
Protein Length886 aa 
Translation table11 
GC content56% 
IMG OID 
Productphospholipase/Carboxylesterase 
Protein accessionYP_003631411 
Protein GI296123633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0843548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACAAC TCTGGATCTC CTTGAGTCTG ACAATCAGCC TGCTGGGCTT TTCCGGTAGC 
CGCGAGGCCT TTGCACAACC ATTCCCGGCT GATCCGGGCC TGCCGCTGAC TATTGAGCAA
TTGGCAGTCG CACAGGTTCC AGCCGGGCTG GCAGCCAGCG GCCAGTTCTA CACACGCGAA
ATCAAAGACG ATTTGGGAAC CCACAAGTAC ACGGTCTTTC TTCCCAAAGG CTACGAATCA
ACCAAACGAT ACCCGACTGT CCTCTTCCTC CATGGAGCCG GTGAGATTGG GAAAGATGGT
CTGAAGCCAC TCTCTGTCGG TCTGGGACCA GCCGTAACGG CCCGACGAGA GACCTTCCCG
ATGATTGTGG TCTTCCCGCA AAGTGAAGAT GAAACCGGTC GATTAACCGG TGGCTGGCTG
GCCGGAACAC CCAGCGGCGA ACGCGCCATC GCCATTCTCG ATGCAGCTTC TAAAGACTTT
GCTATCGACC CGAAAAAGAT CACACTGGCC GGCTGGTCAA TGGGTGGCTT TGGGGCCTGG
TCGTTGGGCG AAAAGTATGC GGATCGTTTC CAGAGTGTGT TGATCGCTTC CGGCGGTGGA
AACCCGGCAG ATGTCGGCCC GCTGAAAAAT ACACCCGTCT GGGCACTGCA CGGTGCCAAA
GATAAGCTGG TTCCTCTAGC CAGTGGCAAA GCCATGGCCG ATGCTCTCGC CGCAGATGGC
GGATCTGTGA CATTCACCGA GTTCCCGGAA TCTGGCCACG ATCTGACGAA CGAAGTCTTC
AATAATGATT CGGTCATTGA GTGGCTGAAG AGCCCCGCTG CCAAACCCGC CTATCAACCC
ACGACCGCAG CTGCCAAGGC GAAGCTGGCC GCTTCACAAG CTGCTCGTCC CTTTACACCG
GCTATCGAAA TTCCCCGTGC CATGGCGGTG CGATTAGGCA ATCGCGTGCT CGACAGCGTC
GCAGCTTCGG CACCACAAAT GGTGGGTAAC AACGGTGTTA TCTATGGACG AATTGCCGAT
ATCTTTGATT CGACAACAGC CTCAGGCCGA CAGTTCAGCG TCCAGTTCTC GAATATCAGC
TATAGCGCTC GACTGGAACG AGTCGTGGTT CAAGGGGTTG CTCCCGAACG ACTGCGGATT
CAACTGGGAC TGCGGAACGC CACCCTCACC ATTGGTGGAA CTTACATTAA CGGTGCCCGG
CATGCCGCCC AGACCAGCGC TATTGGAATC TACATGGGCT TCAACCGACC CGAGTGGCTG
ACTGTCGATG TGCGGCCTTA TCTGGAAAAT GGACGCCTGC GATTTCAGAC ATTGAATGTT
TTTTTCAGCA TTGCTCCCGA TAACTGGTCG ATCTCGCAGC CCGGCTATGT TTCCGCCCAG
GGATTTGGTC TGACGCAGGA GATGGTGCGA GAAAACCTGA TGAGTGGTCT TTACAGCCGC
AAAGGACGCA TTGAAAGCGA AGTCCGGAAT GCCGCACCTA CCATTGTGGC TCAACTGGAG
AACCAGTTGA ATCTCAATGC GTTTGGTGAT GCCAGTGCAC TGGTCTCAGC CGTCTGGCCA
TTGCCCACCA GCACTCCGCA AGTGCGATTG ATTCCCCAGG AGATTGTGAC CGACGCTCAG
GGAGTTTCCA TGGTGATGGC ACTTCAGGCC GCATCGCTGG ATCCTTTGGC GAAACCAGCT
CGTCCCGAAG TTGTCAAAGG GGGTGAGTTA TCCGTCAAGA AGATCGATCC AGGTCTGGAT
CTGCGTGTGG CCGTTTCTCC AGAGGTTCTG GGGCCACTCA CACAGTTGGC GATCGACAGC
GGTCTTTCGC GGGTCAACGT GATGGATGCA CCGGAACCAT CGTTTGCCAA ACTGGCTGAT
CCTGAGTTCC TGAAGACAAT CCTTCCAGGG TTACGACAAC TCCCCGCAGG TTGGGAAGCG
AACACTGTGT TTGTTCTGAC GGAACCGATT CAACTGGCCA CGGCGAGTGA TCTGGCGGGA
GCCTTGCCAG CCTCAGAAAA GGTCTCGGCT CCGCTGGTTC TCAAGGTCAA CCGGGCTTTA
CTGAAAGTGG GGACACGCAC CGACGCGACC GCTGCTTTCA AGCCCACAGC CGAGTTTGAA
TTGTCGATTG CCATGCCAGT ACAGGTTGTT TTGAAGGACC TGCCGAATGG CACAACGACG
CTGCAACTGG TCTACCCCGC GGAGACTCAG GTCACTGCGA ATGGCAAGTA TGCACCCGAC
TTCAAAACGG ATGAACAGAC GATTGAGAAT CAGTTGCTGG CTGACCAGCT CTCTTCGTCC
TGGACCAAGT GGATTTCCAC AGGAGAGGCA GCGGCCTCGG CACTTCCTCC GGTCCAACTG
GGGCAGGCGA GTTACCAGAT CAGTCAGATT CAGGCCACGA ACGAAGAACT GGCAGCGACT
CTCGAAACCC CCAGCATTCG CATTACCAAC AAGTCCGAGG AAGCCTTTAC ATACGAAACC
AAAGGTCTGG GTGTCGCCTG GGGTGGGCCT TACACACTCA AACCTGGTGA GACACACCGC
TATCGCATTG CCTCACCTTT AACCTACCGC CGGCTGGTGG GCTCGACCTA CGAAACCTAC
ACCTTGATGC CCGGCTCACG TTCCGAATTC CGCGTTCCGA GAGAAGGTGG TGCTCCCCGG
TTATACGAAG CAAAAAAGTG A
 
Protein sequence
MRQLWISLSL TISLLGFSGS REAFAQPFPA DPGLPLTIEQ LAVAQVPAGL AASGQFYTRE 
IKDDLGTHKY TVFLPKGYES TKRYPTVLFL HGAGEIGKDG LKPLSVGLGP AVTARRETFP
MIVVFPQSED ETGRLTGGWL AGTPSGERAI AILDAASKDF AIDPKKITLA GWSMGGFGAW
SLGEKYADRF QSVLIASGGG NPADVGPLKN TPVWALHGAK DKLVPLASGK AMADALAADG
GSVTFTEFPE SGHDLTNEVF NNDSVIEWLK SPAAKPAYQP TTAAAKAKLA ASQAARPFTP
AIEIPRAMAV RLGNRVLDSV AASAPQMVGN NGVIYGRIAD IFDSTTASGR QFSVQFSNIS
YSARLERVVV QGVAPERLRI QLGLRNATLT IGGTYINGAR HAAQTSAIGI YMGFNRPEWL
TVDVRPYLEN GRLRFQTLNV FFSIAPDNWS ISQPGYVSAQ GFGLTQEMVR ENLMSGLYSR
KGRIESEVRN AAPTIVAQLE NQLNLNAFGD ASALVSAVWP LPTSTPQVRL IPQEIVTDAQ
GVSMVMALQA ASLDPLAKPA RPEVVKGGEL SVKKIDPGLD LRVAVSPEVL GPLTQLAIDS
GLSRVNVMDA PEPSFAKLAD PEFLKTILPG LRQLPAGWEA NTVFVLTEPI QLATASDLAG
ALPASEKVSA PLVLKVNRAL LKVGTRTDAT AAFKPTAEFE LSIAMPVQVV LKDLPNGTTT
LQLVYPAETQ VTANGKYAPD FKTDEQTIEN QLLADQLSSS WTKWISTGEA AASALPPVQL
GQASYQISQI QATNEELAAT LETPSIRITN KSEEAFTYET KGLGVAWGGP YTLKPGETHR
YRIASPLTYR RLVGSTYETY TLMPGSRSEF RVPREGGAPR LYEAKK