| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3360 |
|---|
| Symbol | |
|---|
| ID | 9140076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 4348917 |
|---|
| End bp | 4349774 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | tRNA/rRNA methyltransferase (SpoU) |
|---|
| Protein accession | YP_003631372 |
|---|
| Protein GI | 296123594 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTCA TTCCGGTGAG TGATCTGCTC GACAAAAACC TGGATGTTTA TCGCGATGTG
AAAGCTCAGA ACGCGATGCG ACATGGCAAG TACTTCATTG TCGAGGGTGT GCGTACTGTC
GAGAGATTAC TGGCCAGTAA GTTTGAGACA GCGTCCATTC TCGTCACTCA GGAAAAAGTC
GCCGCCTGGG CAGGGCTGAT TCCACCCGAG ATTCCCGTCT ATATCATGCC GACCGAGATG
GCCTCTCAAC TGATTGGCTT TCATCTGCAT GTGGGTGTCA TGGCTTGTGG TCTACGGCGA
CGGACAGCTT CTCTGGAACA GCTCCTGGGG CTTCCCGAAC CTCCCAAAGA TCAACGACTG
GCCACAACAA CCTCTATAGA GAAGTACCAC GAGCTAACTG CCTTCCAAAA GCCGCTTCTC
ATCGTCTGCC CGAATTGCGA CAACCCGGAA AATCTGGGTG CCATCATTCG CATTGCCAGT
GCTTTTCGAG CGACAGGTCT CTTATTGGGC AAAGCCTGTT GTGACCCGTT TTCCCGGCGG
GTCATTCGCG TTTCGATGGG CAATATCTTT GGCCTGACGA TTCGCGAAAG CCGCCATCTA
GACCACGATC TGCAGCGTCT TAAAACTGAG TTCGGGTTTG AAACGATGGG CGCAATTCTC
TCGGAATCGG CTGTCTCCCT GAAGAACGTC CAGCGGCCCC ATCGCCTCGC ACTGCTGCTC
GGGAATGAAG CTGAGGGGTT AACGACTGAG TGGATGGACC ACTGCAATCA TCTGGTCACG
ATCCCCATGC CTCCCGATGT GGACAGCCTC AACGTCGCTG TCGCCGCCGG CATCTTCCTC
TATCAACTCA CCAACTGA
|
|---|
| Protein sequence | MPLIPVSDLL DKNLDVYRDV KAQNAMRHGK YFIVEGVRTV ERLLASKFET ASILVTQEKV
AAWAGLIPPE IPVYIMPTEM ASQLIGFHLH VGVMACGLRR RTASLEQLLG LPEPPKDQRL
ATTTSIEKYH ELTAFQKPLL IVCPNCDNPE NLGAIIRIAS AFRATGLLLG KACCDPFSRR
VIRVSMGNIF GLTIRESRHL DHDLQRLKTE FGFETMGAIL SESAVSLKNV QRPHRLALLL
GNEAEGLTTE WMDHCNHLVT IPMPPDVDSL NVAVAAGIFL YQLTN
|
|---|
| |